Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00857 ATGGCCACTTTTCTAACGCTCCTCTTTCTCATCTccgccgccgccgccgcctccggcagccgcACCTTCGCCGAAGACTTCCTCCGATTGCCCTCCCAATCCGACAACGACGACAACGACCAGGGCACTCGCTGGGCCATCCTCCTCGCCGGCTCCAACGGCTACTGGAACTACAGGCACCAGGCTGATGTTTGCCATGCCTATCAAATACTGAGGAAAGGTGGCCTGAAAGAAGAAAACATTATTGTTTTTATGTATGATGACATTGCATACAATGAGGAAAACCCAAGGCAAGGAGTCATCATTAACAAACCAGATGGAGATGATGTTTATGAAGGAGTTCCAAAGGATTACACCGGTGAAGATGTTACTGCTAATAACTTCTATGCTGCTTTACTTGGAAATAAGTCAGCACTTACTGGTGGCAGTGGAAAGGTTGTGGACAGTGGCCCTGATGATCATATATTTGTATACTATACTGATCATGGAGGTCCAGGGGTGCTCGGGATGCCTGCTGGTCCTTACATATATGCATCTGATCTGATCGAAGTCTTGAAGAAAAAGTTTGATGCTGGAACGTATAAAAACCTAGTATTTTATCTGGAGGCATGTGAATCTGGAAGTATCTTTGAAGGTCTTCTTCCTGAAGATATCAATATTTATGCAACAACAGCTTCAAATGCAGAAGAAAGTAGTTGGGGAACATATTGCCCCGGGGAGTATCCTAGTCCTCCCCCAGAATATACAACCTGCTTGGGTGACCTGTACAGTGTTGCTTGGATGGAAGACAGTGACAGACACAATTTGAGAACTGAAACTTTGCACCAACAATATAAATTGGTTAAAGATAGAACTTTATATGGAGATGCATACTATGGCTCTCACGTGATGCAGTATGGTGATGTCGGGTTCAGCAACGATATTCTCTTCCTATATATGGGTACCAATCCTGCTAATGATAATTTAACTTTCGTGGATGAAAACACCTTAAGGTCACGGTCACCTCCTTCAAAAGCAGTCAACCAACGGGATGCTGATCTTGTCCATTTTTGGGAGAAGTTTCGCAAATCTCCTGAGGGATCTCCCAGGAAAAATGCAGCTCAGAAACAAGTTCTGGAAGCAATGTCTCATAGAATGCATGTAGACAAGAGTGTGAAACTTATTGGGAAGCTATTGTTTGGCATTGAGAAGGGTCCAGAATTACTCAACGCTGTTAGACCAGCTGGATTGGCACTTGTTGATGACTGGGACTGCCTGAAAACCATGGTAAGGACTTTTGAGACACATTGTGGATCCTTGTCTCAGTATGGGATGAAACATATGAGATCCTTTGCAAACATCTGCAACGCAGGAGTAAAGAATGAGCAAATGGCTGAGGCCTCGGCACAAGCATGTGACCGTTTTCCTGCCAATCCCTGGAGTTCTCTGCAAAGGGGTTTCAGTGCATAA 1449 0.4327 MATFLTLLFLISAAAAASGSRTFAEDFLRLPSQSDNDDNDQGTRWAILLAGSNGYWNYRHQADVCHAYQILRKGGLKEENIIVFMYDDIAYNEENPRQGVIINKPDGDDVYEGVPKDYTGEDVTANNFYAALLGNKSALTGGSGKVVDSGPDDHIFVYYTDHGGPGVLGMPAGPYIYASDLIEVLKKKFDAGTYKNLVFYLEACESGSIFEGLLPEDINIYATTASNAEESSWGTYCPGEYPSPPPEYTTCLGDLYSVAWMEDSDRHNLRTETLHQQYKLVKDRTLYGDAYYGSHVMQYGDVGFSNDILFLYMGTNPANDNLTFVDENTLRSRSPPSKAVNQRDADLVHFWEKFRKSPEGSPRKNAAQKQVLEAMSHRMHVDKSVKLIGKLLFGIEKGPELLNAVRPAGLALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANICNAGVKNEQMAEASAQACDRFPANPWSSLQRGFSA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00857 482 Gene3D - 42 338 - -
Cca05g00857 482 PIRSF Legumain 1 482 IPR001096 GO:0006508|GO:0008233
Cca05g00857 482 PANTHER HEMOGLOBINASE FAMILY MEMBER 4 481 IPR001096 GO:0006508|GO:0008233
Cca05g00857 482 PRINTS Hemoglobinase (C13) cysteine protease signature 45 69 IPR001096 GO:0006508|GO:0008233
Cca05g00857 482 PRINTS Hemoglobinase (C13) cysteine protease signature 70 99 IPR001096 GO:0006508|GO:0008233
Cca05g00857 482 PRINTS Hemoglobinase (C13) cysteine protease signature 117 132 IPR001096 GO:0006508|GO:0008233
Cca05g00857 482 PRINTS Hemoglobinase (C13) cysteine protease signature 145 164 IPR001096 GO:0006508|GO:0008233
Cca05g00857 482 PRINTS Hemoglobinase (C13) cysteine protease signature 194 210 IPR001096 GO:0006508|GO:0008233
Cca05g00857 482 Gene3D - 342 469 IPR046427 -
Cca05g00857 482 PANTHER VACUOLAR-PROCESSING ENZYME 4 481 - -
Cca05g00857 482 PIRSF AE 1 482 IPR043577 GO:0004197|GO:0051603
Cca05g00857 482 Pfam Peptidase C13 family 44 314 IPR001096 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00857 Cca-Chr5 23348676 23355781 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00857 K01369 - gmx:547700 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00857 05 23348676 23355781 Cca05g00857 05 23348676 23355781 ECH