Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00084 ATGGCTCAAGATAATCCAAGTAGTGCTCCTGATAACAATGCTGGAGGTGGAGGTTCAGGGGGTGGCTCTAGCAAAAATGAAGGTGGCACAAAAAAAGTGGATTTGCAGCCACATGCTGTGCAAGAGCAATTACCTGGAGTTCAATATTGCGTCAAGAGTGCCCCTCCATGGCGTGAAGCAGTGCTATTGGGGTTTCAGCATTATTTTTTGACTCTTGGCATGACCGTGCTGATTCCAACTATACTTGTTCCTCAAATGGGTGGAGGAAATGAGGAGAAGGCTAGGGTGATTCAGACCCTTCTTTTTGTTTCCGGAATAAGCACATTTCTTCAATCTTTGTTCGGAACTCGACTTCCAATTGTAGTTGTTGGTTCATGCACTTACCTAGTACCCTTGATTTCCATTATCCAAGCCAACAGATACACTTCATACACAGATCCTTATGAGAGGTTTACAAATACAATGAGAGGGATTCAAGGTGCATTGATCATAAGTGGATGTTTTCAAATGGCTTTTGGATTTTTCGGTTTTTGGAGGAATGCTGTTAGGTTCCTTAGTCCACTCTGTGTAGTCCCTTATGTAACTTTCACTGGACTCAGTCTCTACAGACTTGGTTTCCCAATGCTGGCAAAATGTGTTGAAATTGGGCTTCCGGCACTAGTTATCTTTGTTTTCATCTCACAGTATCTTAATCGTTATTTTGTCTCCAAGAAGCCTAAATATGACCGATTTTCAGTGCTAATTACTGTTTCAATTGCATGGTTATTTGCATTTATTCTAACTTCATGCACTACGTATAACAAGAAGCCAGAAAGTACACAGAATAGCTGCCGCACTGATCGTGCTGGACTTGTTAGTTCCGCTCCATGGGTGTATATTCCATTCTTCTTCCAATGGGGGCCTCCTACCTTCGATGCTGGGGAGGCTTTTGCTATGGTCGTTGCTTCTTTTGTTTCTCTTTTTGAGTACACTGGTACATGTTATGCTGCGGCAAGATATGGAAGTGCCACACCAGTGCCACCATCTGTTATCAGCCGTGGGGCTGGCTGGTTGGGATTAAATGCTTGCCTCAGTGCCGTCTTTGGTTCTGTAACTGGATTTTCTGCATCAGTGGAAAATGCTGGTTTGTTGGCATTGACAAAAGCAGGAAGCAGAAGGGTCGTTCAAATATCATCTGGTTTTATGATTTTCTTCTCTGTATTTGGCAAATTTGGAGCACTTTTTGCTTCAGTACCTCTGCCAATTATGGCAGCATTATATTGTGTATTATTCGGCTATGTGTCTTCCGCGGGTCTTGATTTTCTCCAATTCTCCAACCTCAACAACTTCAAAAGTAAATTTGTGTTGGGTTTCTCATTCTTCCTTGGAATCTCCATACCACAATATTTCTCAGAATATTATAATGTGAAGCAGCATCATGGAGTTCCTAGATGGTTCAATGATACCTTCACTGTCATCTTCATGTCCCACACAACAGTTTCTGCATTGGTTGCTTTCGTTTTGGATCTCACACTCGCTCGTGAAAATGATGAAGCACGTAAAGACAGTGGTTTGCAGTGGTGGGAGAGGTTCAACTTGTACAGCGCAAATGTTAAGAGTGATGAATTCTATTCTTTACCATACAGTCTCAATAAGCTTTTTCCGCCAATTTGA 1653 0.4217 MAQDNPSSAPDNNAGGGGSGGGSSKNEGGTKKVDLQPHAVQEQLPGVQYCVKSAPPWREAVLLGFQHYFLTLGMTVLIPTILVPQMGGGNEEKARVIQTLLFVSGISTFLQSLFGTRLPIVVVGSCTYLVPLISIIQANRYTSYTDPYERFTNTMRGIQGALIISGCFQMAFGFFGFWRNAVRFLSPLCVVPYVTFTGLSLYRLGFPMLAKCVEIGLPALVIFVFISQYLNRYFVSKKPKYDRFSVLITVSIAWLFAFILTSCTTYNKKPESTQNSCRTDRAGLVSSAPWVYIPFFFQWGPPTFDAGEAFAMVVASFVSLFEYTGTCYAAARYGSATPVPPSVISRGAGWLGLNACLSAVFGSVTGFSASVENAGLLALTKAGSRRVVQISSGFMIFFSVFGKFGALFASVPLPIMAALYCVLFGYVSSAGLDFLQFSNLNNFKSKFVLGFSFFLGISIPQYFSEYYNVKQHHGVPRWFNDTFTVIFMSHTTVSALVAFVLDLTLARENDEARKDSGLQWWERFNLYSANVKSDEFYSLPYSLNKLFPPI 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00084 550 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 10-RELATED 23 549 - -
Cca05g00084 550 MobiDBLite consensus disorder prediction 1 30 - -
Cca05g00084 550 Pfam Permease family 59 463 IPR006043 GO:0016020|GO:0022857|GO:0055085
Cca05g00084 550 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 23 549 - -
Cca05g00084 550 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00084 Cca-Chr5 1872281 1876228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00084 31 548 Organic Solute Cotransporters AT1G65550 60.038 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00084 - - gmx:100801755 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00084 05 1872281 1876228 Cca05g00084 05 1872281 1876228 ECH