Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01659 ATGGCGAAAAAGGCAGTTTTGATCGGAATCAACTACCCGGGAACGAAGGCGGAGCTGAGAGGGTGCGTAAACGACGTGTGGAGAATGCAGAGGTGTCTGGTGGAGCGATACGGGTTCTCCGAAGACGACATCACCGTTTTGATCGACACGGACAGGTCGTACAAGGAGCCAACGGGAAAGAACATTCGCACGGCGCTCACCGCGCTCGTCCGATCGGCGCAGCCTGGTGACGTGCTGTTCGTGCACTACAGCGGCCACGGCACGCGCCTCCCCGCCGAGACCGGGGAGGACGACGACACTGGCTACGACGAATGCATTGTTCCCTCTGATATGAATCTCATCACTGACGATGATTTCAGGGACTTTGTTGATGGGGTCCCTAGAGGATGCAGGATCACAATTGTGTCTGATTCTTGCCACAGTGGTGGCCTACTTGAAGAAGCTAAGGAACAGATAGGAGAGAGCACAAAGGGAGAGGATGAACATtctggctctggctctggctctggctTTGGATTTTCTAGCTTTCTACATCGGAAGGTGGAAGATGCCATCGAGTCTCGCGGATTCCATGTCCCTTCAGCATTACGCCACCATGGTGATGAAAATGAAGATAGGGACATTGCACTTCCACATGGGGACTATGGCTATGTAAAGAATAGGTCTTTGCCCCTTTCAACTCTGATTGATATACTGAAGCAGAAAACGGGGAAAGATGACATTGATGTTGGGAAACTGAGACCAACCCTCTTTGATGTGTTTGGGGAAGATGCTAGTCCTAAAGTGAAGAAGTTCATGAATGTGATTTTAAACAAGCTCCAACAAGGAAGTGGTGAAGGTGGGGGTGGAATATTGGGGTTAGTGGGTGGTCTTGCCCAAGAGTTTCTGAAGCAAAAGCTTGATCAGAATGATGAGGGGTATGCAAAGCCTGCACTGGAGACACATGTAGAGAGTAAACATGAGGCATATGCTGGATCAAACAAACACGCCCTTCCGGATGGTGGGATTCTGATGAGTGGTTGCCAAACTGACCAAACTTCTGCAGATGCAAGCCCTTCTGGGAATGCTTCTGGTGCTTATGGGGCATTCAGCAATGCAATTCAGGCTATAATTGAGGAAAGTGGTGGTTCAATCACAAACCATGAGCTTGTTTCCAAGGCAAGAGAGAAGCTGAAGAGGGAGGGTTTCACTCAGAAGCCTGGACTCTATTGCAGTGATCACCATGTTGATGCTCCTTTTGTGTGTTGA 1248 0.4856 MAKKAVLIGINYPGTKAELRGCVNDVWRMQRCLVERYGFSEDDITVLIDTDRSYKEPTGKNIRTALTALVRSAQPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFRDFVDGVPRGCRITIVSDSCHSGGLLEEAKEQIGESTKGEDEHSGSGSGSGFGFSSFLHRKVEDAIESRGFHVPSALRHHGDENEDRDIALPHGDYGYVKNRSLPLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMNVILNKLQQGSGEGGGGILGLVGGLAQEFLKQKLDQNDEGYAKPALETHVESKHEAYAGSNKHALPDGGILMSGCQTDQTSADASPSGNASGAYGAFSNAIQAIIEESGGSITNHELVSKAREKLKREGFTQKPGLYCSDHHVDAPFVC 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01659 415 Pfam Caspase domain 3 408 - -
Cca04g01659 415 SUPERFAMILY Caspase-like 6 125 IPR029030 -
Cca04g01659 415 MobiDBLite consensus disorder prediction 339 355 - -
Cca04g01659 415 Gene3D - 1 176 - -
Cca04g01659 415 Gene3D - 302 414 - -
Cca04g01659 415 PANTHER METACASPASE-5 1 415 - -
Cca04g01659 415 PANTHER METACASPASE-4 1 415 - -
Cca04g01659 415 MobiDBLite consensus disorder prediction 150 170 - -
Cca04g01659 415 MobiDBLite consensus disorder prediction 335 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01659 Cca-Chr4 26376932 26380240 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01659 - - gmx:100802658 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01495 10 23892031 23895361 Cca04g01659 04 26376932 26380240 PCT