Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01790 ATGAAGAAGGGGAAGCAGAGCAAGCTGGTTCAGATCATAACGACGCCGTTTAGAGTGTTGGGGAAAGCGAGGGACATGTACGTGAGGAGCATAACGAAGTGCGGTCACAACATGAACTATAGCAACCCCGTCGACGCGGCGGGGCGGTTCCAGGCTTTGCCAAGAAGCTACAGCGCTGCCACGTCACGCTCTGACAACGACGATTTCGCCGAGCTTTTGAGGGCCGCCTCCGCCAGGACTTTGGTCAACACAATCGATATGGATTTGGTTCTCAagcagcagcagcagcagcagcagcagcagGCCCAGGCCCAGGCCCAGCCCCGCCCCGTTTCTTCCAATGGGTTGCCCAAGTCCACCAGCGTTGGCATGGGCCGGATCGACGAGGACTCGCCCTTTGATTTGGGCCAAGGGGAGCTTCCCGCCCTGCCCAAAGCCTACCCCAGAAGTAGAAGCTACGCTGTTGGAAAGACAAGTGCTGTTTTGGTTTAG 492 0.5386 MKKGKQSKLVQIITTPFRVLGKARDMYVRSITKCGHNMNYSNPVDAAGRFQALPRSYSAATSRSDNDDFAELLRAASARTLVNTIDMDLVLKQQQQQQQQQAQAQAQPRPVSSNGLPKSTSVGMGRIDEDSPFDLGQGELPALPKAYPRSRSYAVGKTSAVLV 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01790 163 PANTHER OS07G0123800 PROTEIN 2 162 - -
Cca03g01790 163 PIRSF UCP031279 1 162 IPR016972 -
Cca03g01790 163 MobiDBLite consensus disorder prediction 94 120 - -
Cca03g01790 163 MobiDBLite consensus disorder prediction 94 144 - -
Cca03g01790 163 PANTHER - 2 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01790 Cca-Chr3 37101560 37102733 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01790 - - gmx:100801557 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01790 03 37101560 37102733 Cca03g01790 03 37101560 37102733 ECH
Cca05g00079 05 1800439 1801546 Cca03g01790 03 37101560 37102733 PCT