Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01776 ATGGACCCCACGTGTTCAGTTCCCACTCCTTCAAATACCCCTCCCAAACGCTTCCTTTCCTCCCTTTTCCCCTTCTCTCCTCCCTCCGGTTCACTCTTTTCAATTAACCGGTTTTTTCCCTCTCTTATTTCGTTCTTTGCATTTCAACGAACCATGTTGTTCCACGAAGCGGTCCAGTTACCATGCTCTGATCCGGTTCACGAAATCATGCTGACCGAAAGCGAAATAGAAGACCTCTTTTCTCTCATTAACCAAACGAGGGACCCGGTCAGCCCCGGATCCGGTTCACAGGGTTCGAACCGGGCGGTTTACTCGCCAGAGGAAAGAAAGCGGAGACGCATGCAGTCGAACCGGGAATCTGCCCGAAGGTCACGCTACCGAAAGAAGAAGCACGTAGAGAATCTCACGAGCCAACTGAACCGGTTGAGAATCCAAAACCGGGAACTCAAAAACCGGCTTGCCTCCACCATGCACCACCATCTACTACTTTCCCTACATAATGATCATCTTGAATCCGAATCCGTTGCCCTTATGGCCAAACTTTCGGGTCTATGTGCCATTTTAGGCACTATGCTTTCACAATAA 585 0.4974 MDPTCSVPTPSNTPPKRFLSSLFPFSPPSGSLFSINRFFPSLISFFAFQRTMLFHEAVQLPCSDPVHEIMLTESEIEDLFSLINQTRDPVSPGSGSQGSNRAVYSPEERKRRRMQSNRESARRSRYRKKKHVENLTSQLNRLRIQNRELKNRLASTMHHHLLLSLHNDHLESESVALMAKLSGLCAILGTMLSQ 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01776 194 SMART brlzneu 105 176 IPR004827 GO:0003700|GO:0006355
Cca03g01776 194 MobiDBLite consensus disorder prediction 87 103 - -
Cca03g01776 194 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 112 127 IPR004827 GO:0003700|GO:0006355
Cca03g01776 194 SUPERFAMILY Leucine zipper domain 109 163 IPR046347 GO:0003700|GO:0006355
Cca03g01776 194 Pfam bZIP transcription factor 108 156 IPR004827 GO:0003700|GO:0006355
Cca03g01776 194 MobiDBLite consensus disorder prediction 87 130 - -
Cca03g01776 194 PANTHER BZIP TRANSCRIPTION FACTOR 44 70 193 - -
Cca03g01776 194 MobiDBLite consensus disorder prediction 104 121 - -
Cca03g01776 194 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 107 154 IPR004827 GO:0003700|GO:0006355
Cca03g01776 194 Coils Coil 132 159 - -
Cca03g01776 194 CDD bZIP_plant_GBF1 110 157 IPR045314 GO:0003700|GO:0006355
Cca03g01776 194 Gene3D - 107 160 - -
Cca03g01776 194 PANTHER BZIP TRANSCRIPTION FACTOR 70 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01776 Cca-Chr3 36932465 36933117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01776 65 188 bZIP Transcription Factor Family AT3G49760 38.168 7.62e-20 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca03g01776 bZIP_1 1.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01776 - - ccaj:109788674 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00897 05 24188194 24188724 Cca03g01776 03 36932465 36933117 PCT