Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01775 ATGCATTATTTAAATTGCTCCCAATTCACAATAGTTCAAAACGTGGAGCATAGGTTGAAGCATGAGACAGAAGAGAAGGTAACTGGGATCACGCACCATTCAAATTTATTGCTCTGCCTCATATCACGCCCCCATTTAATTTTCACTTCCACCCAATTCGCATTCCTTTCTATGGCTTCGGCAAAACCCAAACCAACGAAAAGACTCGCAGAATTTCTCAAGGAGCAACAAGACCCTTTCATCTTAGACCTTTACCTTTTAGAAAGAGGCTACTCAACAAAAACAAATGGAGACAAAAAGAGAGACCCTCTCTTCCCAATTTCCAAACTTCTCACAACTCTACACAAGAAGCTCCTTTTCCACAACCGTAGCTGCATTCTCATTAGGGACTCTCAAATCATAAACCAACATGTTAATGTTAGTGTCCCTCATGAAACCGAGAGCACTGATCACACTATTCATGACACGGATCGCTTCTCCTTCTCAACAGCTACCAACTCAACCGTCTACCTCTCATGCTCAGACATTGATGAAGATGGAACCTCCTTGTCGCCACAAAAAGACAAACCCTCGTTTTCTCCAAATACTTCCGACATAAGAGTACTACAGAGCCAGCAGGGTACGAATAATGAAAAACAGAACCAGATATGTTTAGAAGGTTGCCCTGTTCCAGAGTCCGGAAATATTTGTGTGACGCAGCGGACATTGAATCAGGATGTTTCGAGAATGGAAGAGGGAATGAAAATGAGCAATTGTTGTGTTATTGTACCGAAGAAAATCACGGAGGATTCAGTGTTATCGGTGGCTCTGTGGAGTTCGTTTATTCAGTCAGCGAGGAGAGAAAAATGTAGAAAGGAACTGCGAGAGATTCTGGGGGCAAATCCAAATGTTTGCCACGTGTTGAAATCTAGAACTTTATTGCACAAGGCAAAGCAGCTACTATTTGATTGTGTGAGAGAAATTAGTGTAAATGTTTCGAGAAAAGGTTGTAGAGAAGAGCAATGTTTGAAAGAATTAAATTTAAGAGGACGTGAAGAGGTGGGGAAGAGGAGAAGGAAATTGGGAAAAGTGGGTGTGAATGAGACAAATATAAGCAACTTAAGTTTGGATTCTATGGTCGAATGGAGTGAGTTGAAGCCACAAGTGAGACATATTTGCGTTGAGGTAGCCGATGCGGTTTTGGAAGGCGTGACCAACGAAATTGTGGCAGAGATGATTCAAGTTGTGTCACCAACCTTGTAA 1242 0.4195 MHYLNCSQFTIVQNVEHRLKHETEEKVTGITHHSNLLLCLISRPHLIFTSTQFAFLSMASAKPKPTKRLAEFLKEQQDPFILDLYLLERGYSTKTNGDKKRDPLFPISKLLTTLHKKLLFHNRSCILIRDSQIINQHVNVSVPHETESTDHTIHDTDRFSFSTATNSTVYLSCSDIDEDGTSLSPQKDKPSFSPNTSDIRVLQSQQGTNNEKQNQICLEGCPVPESGNICVTQRTLNQDVSRMEEGMKMSNCCVIVPKKITEDSVLSVALWSSFIQSARREKCRKELREILGANPNVCHVLKSRTLLHKAKQLLFDCVREISVNVSRKGCREEQCLKELNLRGREEVGKRRRKLGKVGVNETNISNLSLDSMVEWSELKPQVRHICVEVADAVLEGVTNEIVAEMIQVVSPTL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01775 413 PANTHER DUF4378 DOMAIN PROTEIN 58 410 - -
Cca03g01775 413 PANTHER DUF4378 DOMAIN PROTEIN 58 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01775 Cca-Chr3 36920864 36922948 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01775 - - ccaj:109788677 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00895 05 24125789 24127383 Cca03g01775 03 36920864 36922948 PCT