Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01766 ATGAAGGAGGACGCTAACAAAGATAAAGACAAAAACAGGAGGGTTTGGGGAGCTTTACTCTTCGGTTTGATTGGCGCCTCCGTCACTACCTTTGCGGTCGGTCAGCTGCGGAGGACTGTTGAATGGTTCTATGTTCAGATGTCGAGGACGCAGTCGTCGTGGAAAGGAGAGAGTGGTGGTTCTTTCCGATCAGCTTTTCAGGAGGAAGCATGGAGGAGACACAATaagcgaatgcaagaggagttggaggaggagatggaaagagtcGAGCGAATAAGGCGTATGCAAAGTGTGTTTAACAGAGAAAGGAATAAGTATAAAAGAAGCTATGAGAGCTGGAGGGAAAGCGGTCCTGGTGCATATCATCAGCATTACCAGAGAGAAGATTGGTACTGGAAGGCTGATACGTCCTTTAGAGACAGGAGGACTAATTATCGAGAAACTCCAAGAGAGAGTGGAACCTATGCATTATCACATCACTACTCAGTTTTGGGTCTTGATAGGTTTAGAAAAACACCATATTCAGAGGCTGAGATTAAGACAGCATTTAGGACCAAGGCGAAGGAGTATCATCCTGATCAAAACCAAGATAATATAGTGGCTGCTGAGGCAAAGTTCAAGGAAGTGTTGACTTCATATGAGGCCATAAAACAGGAAAGGAGGAACCATCATTTGTAA 678 0.4189 MKEDANKDKDKNRRVWGALLFGLIGASVTTFAVGQLRRTVEWFYVQMSRTQSSWKGESGGSFRSAFQEEAWRRHNKRMQEELEEEMERVERIRRMQSVFNRERNKYKRSYESWRESGPGAYHQHYQREDWYWKADTSFRDRRTNYRETPRESGTYALSHHYSVLGLDRFRKTPYSEAEIKTAFRTKAKEYHPDQNQDNIVAAEAKFKEVLTSYEAIKQERRNHHL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01766 225 Gene3D DnaJ domain 153 225 IPR036869 -
Cca03g01766 225 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 223 - -
Cca03g01766 225 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 223 - -
Cca03g01766 225 CDD DnaJ 160 214 IPR001623 -
Cca03g01766 225 Coils Coil 68 95 - -
Cca03g01766 225 SUPERFAMILY Chaperone J-domain 158 221 IPR036869 -
Cca03g01766 225 ProSiteProfiles dnaJ domain profile. 159 221 IPR001623 -
Cca03g01766 225 Pfam DnaJ domain 160 221 IPR001623 -
Cca03g01766 225 PRINTS DnaJ domain signature 183 198 IPR001623 -
Cca03g01766 225 PRINTS DnaJ domain signature 201 221 IPR001623 -
Cca03g01766 225 SMART dnaj_3 158 221 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01766 Cca-Chr3 36806174 36811990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01766 - - gmx:100812371 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01766 03 36806174 36811990 Cca03g01766 03 36806174 36811990 ECH
Cca05g00880 05 23848929 23853500 Cca03g01766 03 36806174 36811990 PCT