Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01765 ATGTCGCGGAGACCGGCGAATCTGTCTCGGCGATTCGGAGACAGTGGAGGTGGCTTGTTTTCATCTGCGAAATCAAGGTCTTCGCCGGTTTTGTCAGTTGGGCTTATAATCGTGGGAGGCCTGTTTCTCATTGCCTATGTGTACAAGGGCTCAGGTGGATTTGGCAGCCGTTTGGAGTCTGTCAGCAGGGTTGAAGGTGATTATTTGTGTACCGGAGAGGTCCAACGTGCAATTCCCGTTTTGCAGAAAACATACGGTGATAGCTTACATAAAGTTTTGCACGTTGGTCCTGATACTTGCTATGTGGTCTCTAAATTGCTAAAGGAGGAGGAAACTGAAGCCTGGGGTATAGAACCTTATGATATAGAGGATGCTGATGGTAATTGCAAAGCACTTATCCGCAAAGGCATTGTCCGTATGGCTGATATCAAGTTTCCTCTTCCATACAGGCCAAAATCTTTCTCTCTCGTAATTGTTTCGGATGCCCTTGATTACTTATCTCCCAGATACCTTAACAAAACTCTTCCGGATTTGGCCAGGGTATCAACTGATGGAATAGTGATATTTACTGGTTTTCCAGATAATCAAAAGGCTAAGGTTGCAGATGCTAAGATGAGGAGTTCATCCTGGTGGGTGCGGTATTTCCTTCAGATTAACTTAGAGGAGAATGAAGCTGCTTCCAAAAAGTTTGCACAGGCTTCAACCAAGAGTTCATACGTTCCAAGATGCCAGATATTCCACGTGAACTCTCTCCATTGA 759 0.4506 MSRRPANLSRRFGDSGGGLFSSAKSRSSPVLSVGLIIVGGLFLIAYVYKGSGGFGSRLESVSRVEGDYLCTGEVQRAIPVLQKTYGDSLHKVLHVGPDTCYVVSKLLKEEETEAWGIEPYDIEDADGNCKALIRKGIVRMADIKFPLPYRPKSFSLVIVSDALDYLSPRYLNKTLPDLARVSTDGIVIFTGFPDNQKAKVADAKMRSSSWWVRYFLQINLEENEAASKKFAQASTKSSYVPRCQIFHVNSLH 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01765 252 PANTHER PROTEIN, PUTATIVE-RELATED 1 252 - -
Cca03g01765 252 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 252 IPR044689 GO:0008168|GO:0045488
Cca03g01765 252 CDD AdoMet_MTases 91 192 - -
Cca03g01765 252 Gene3D Vaccinia Virus protein VP39 75 245 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01765 Cca-Chr3 36802227 36805560 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01765 K23871 - gmx:100815049 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01765 03 36802227 36805560 Cca03g01765 03 36802227 36805560 ECH
Cca05g00879 05 23836518 23848046 Cca03g01765 03 36802227 36805560 PCT