Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01763 ATGGACCTCGCTGCTCTTTTGACTTCTGCTGGAATGAATATTACTGTGTGCGTGGTGCTCTTTTCACTCTACTCTGTGTTAAGGAAACAGCCCAGCAATGTCAATGTGTACTTTGGAAGAAAGCTAGCTTCTCGCCGTTCAAAAAGCCATGATGTTTGTTTGGAAAGATTTGTCCCCTCTCCTACGTGGGTAATGAAAGCATGGGAAACAACTCAGGAAGAACTACTGACTATCGGGGGCTTGGATGCTGTGGTTTTTAGCAGGATGGTTGTGTTCAGCATTCGAGTTTTTTCTGTTGCTGCTGTTATCTGTATTGTTCTAGTGCTTCCAGTGAATTATTATGGTCAGGACAGAATACATAAGAATATACCTTTTGAGTCACTCGAAGTATTCACCATTGAGAATGTTAAAGAAGGATCCAGGTGGCTTTGGGCTCATTGTCTCGCGTTATACATCATAACGTTAACAGCTTGTTCTCTTCTTTACCGTGAATACAAGAGCATCAGTAATTTGCGGCTAACACATATTACTGCATCACCACCAAATCCTAGTCATTTTGCAATTCTTGTCCGAGGAATACCATGGTCTCCAGAACAATCATACTGTGATACAGTGAAAAAGTTTTTCTCATTTTACCACTCATCAACATATTTGTCACACCAAATAGTGTACAAGTCTGGTGCAGTTCAAAAACTGAAGGATGATGCAGAATATATGTGTAAGATGCTCAGTTCTGGTTGTGGTTCAGTGCAACCAACATGTAAGCCAAGCTTTGCGCAATGTTACTTCTGTGGAGGATCCACTAATTCTTTTAAGATTATTTCTAATGATATTGATAGTATGCATGGGAGATCAGGCTACAGTGACCTGCATATTAATGCACGAAAAAAGGAATGTGCAGCTGCTTTTGTGTTCTTTAAAAGTCGGTATGCTGCTCTTACGGTTGCCCAAAATCTCCAAACAGCAAATCCTATGTTATGGGTCACAGACCTAGCTCCTGAACCACAGGATGTTTACTGGTCCAACCTTTGCATACCATACAGGCAACTTTGGATCCGGAAGATATCTATATTTGCTGCTTCTATCACCTTTGTGCTTGTATTCCTTATCCCTGTCACATTCGCCCAAGGCTTGACTCAACTGGAAAAGCTTGAAAAAATGTTCCCTTTTCTGGCAGGGACACTTCAAAAGAAATTTGTGATTCAGCTGGTGACTGGTTACTTGCCAAGTGTGATTTTGGTTTTATTTTTATATGCTGTTCCACCAATGATGATGCTATTTGCAACAGTAGAGGGATCCATTTCTCGTAGTGGAAGGAAGCTGAGTGCATGCACCAAAGTTCTGTACTTCACAATTTGGAATGTGTTTTTTGTTAATGTTTTTGCTGGATCTGTTATCAGCCAACTCGCAGTCTTTAGTAGTATAACTGAACTACCTGCCCAACTTGCCAAGGCGGTCCCAGTGCAGAGATTCATACTTGGGTATAAGGAGGATACAATGAATGGCAACCTAACTTTTCCATACCATACAGAAGTTCCAAGGATCTTACTATTTGGATTCCTTGGGTTCACCTGCTCTATTCTGGCACCCCTAATATTGCCCTTCTTATTGTTTTACTTTGTACTTGCCTACCTCGTTTATCGAAATCAGATTCTCAATGTATATATTAGAAAATATGATAGCGGGGGACAGTTCTGGCCCATTGCTCACAACACAGCGGTGGTTTCATTGATCTTCGCTCAAGTAATTGCACTCGGGGTTTTTGGACTAAAACGCTCAACAGTTGCATCTGGATTTACCATTCCACTGCTGATTTGCACCGTTCTATTTCACCAATATTGTAGGCAGCGATTTCTCCCAGTATTCAAGAACAACGCAACACAGGTTCTTATTGATATGGATCGGAAAGATGAGCGTTGTGGGAGAATAGAACAGATTTTTGAACAATTACATTCAGCGTACTGCCAGTTCACTAGTTCTTCTCAATCCGAATGTTTCAGCAGTCATCAAGGGGAAAGGGAAATTGTTCGAACTCCAGAAGATGTGGAGCCAGGCAAGGAAATTAGCCAACAAGATTTATCATGGCCAGTTCATCGTAATTTGACTTCGGATAAACCGGTACTTGGCGGGACGTAA 2136 0.4139 MDLAALLTSAGMNITVCVVLFSLYSVLRKQPSNVNVYFGRKLASRRSKSHDVCLERFVPSPTWVMKAWETTQEELLTIGGLDAVVFSRMVVFSIRVFSVAAVICIVLVLPVNYYGQDRIHKNIPFESLEVFTIENVKEGSRWLWAHCLALYIITLTACSLLYREYKSISNLRLTHITASPPNPSHFAILVRGIPWSPEQSYCDTVKKFFSFYHSSTYLSHQIVYKSGAVQKLKDDAEYMCKMLSSGCGSVQPTCKPSFAQCYFCGGSTNSFKIISNDIDSMHGRSGYSDLHINARKKECAAAFVFFKSRYAALTVAQNLQTANPMLWVTDLAPEPQDVYWSNLCIPYRQLWIRKISIFAASITFVLVFLIPVTFAQGLTQLEKLEKMFPFLAGTLQKKFVIQLVTGYLPSVILVLFLYAVPPMMMLFATVEGSISRSGRKLSACTKVLYFTIWNVFFVNVFAGSVISQLAVFSSITELPAQLAKAVPVQRFILGYKEDTMNGNLTFPYHTEVPRILLFGFLGFTCSILAPLILPFLLFYFVLAYLVYRNQILNVYIRKYDSGGQFWPIAHNTAVVSLIFAQVIALGVFGLKRSTVASGFTIPLLICTVLFHQYCRQRFLPVFKNNATQVLIDMDRKDERCGRIEQIFEQLHSAYCQFTSSSQSECFSSHQGEREIVRTPEDVEPGKEISQQDLSWPVHRNLTSDKPVLGGT 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01763 711 Pfam Cytosolic domain of 10TM putative phosphate transporter 186 342 IPR027815 -
Cca03g01763 711 Pfam Calcium-dependent channel, 7TM region, putative phosphate 502 588 IPR003864 GO:0016020
Cca03g01763 711 Pfam Calcium-dependent channel, 7TM region, putative phosphate 353 488 IPR003864 GO:0016020
Cca03g01763 711 Pfam Late exocytosis, associated with Golgi transport 6 164 IPR032880 -
Cca03g01763 711 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 2 489 - -
Cca03g01763 711 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 489 683 - -
Cca03g01763 711 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 489 683 IPR045122 GO:0005227
Cca03g01763 711 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 489 IPR045122 GO:0005227
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01763 Cca-Chr3 36749723 36761101 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01763 K21989 - gmx:100789875 1231.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01763 03 36749723 36761101 Cca03g01763 03 36749723 36761101 ECH
Cca05g00877 05 23783619 23795727 Cca03g01763 03 36749723 36761101 PCT