Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01755 ATGAAGAGAGGGAAAGATGATGAAAAGGTGATGGGGCCAATGTTCCCTAGACTACATGTCAATGATACAGAGAGGGGAGGTCCAAGAGCACCACCCAGGAATAAGATGGCCCTCTATGAGCAGTTTAGTATTCCATCTCAAAGGTTCAATTCAGGTGTTCTGCCACTCAACCCAAATATTTCAAGTAATACAGTTCCCCCAGCATCCTCAAGTCAGGGGACCGTCCCTGAGAGAAATCATGTCTTCCCTGTTCACTTGCCACCGCAAAATCCTATTCGTCGAGCTGAAAAGTGCATCTCTCGCCAGTCAGAAGGGGCAAATTTGAGTGCTTCTCTTGAACAGAGAAAGAAGATAGATGAAGATGACTTTAGGGTTCCTGTATACATTCATTCAAGGATTGGTCAATGTAATAATAAAAGTGTTGAGAGTTTTGATGCGAAAAAGCTCACTCCTACAGGCTTTAGGTATTTCGGTGGTTCTGTTGCAGGGCAAAGTGATTGTGAAAGGGATCCAAAGCAATTTGGCTCCTCACTTGTCAATATGAGAAAAGATGTGAGAAGCGAGATTGATGGTCTTCCACAAGTAAGTACAAGGAAGGAGCATCCATTGATGTCTGTCACAAGCATATCAACTGGAGAAAATATTGACACAGTAAAACACGCTAAGGTCACTCCGAATCAAGAGTTTCAAGATTGTCATGTATCAAAACAAAACAGATTACGGCAAGGAGATGCTTGCTTACGGCATGATTGTGGAGTGGCGTCTCAATCCAATGACATTGGACATAATGGTTGCCTTGTTGAATCTGCAAGGGAGACAGACAAGGGAAATGCCCCTACAGTAAACAAAATTAGTCCAGCTGAGGCAATCAATGATACCAGACATCATGGTACCAGGACGGGCAGTTCGATACAGAGGGGAAACTTAAATAAAAGTGACAATGCTTCCAAGATCTCCATGGTAGAAAATTTGTCAACTGCGAAAATTTCTCCCGATGATGTTGTTGGAATAATAGGTCAAAAACATTTCTGGAAAGCTAGAAAAGCCATTGCTACTCAACAGAGAGTGTTTGCTGTCCAAGTGTTTGAGTTGCATAGATTGATAAAGGTCCAACAGCTGATTGCTGGATCACCAGATATTTTGGTTGAAGATGGTACTTTTCTGGGAAAGTCTCCTGCGAAGGAATCTACTCCCAAGAAACTCCCACTGGAATATGTTGTAAAACCTCGGCAACAAAACCTTAAGCACAAAGATGATTCCGAAAAGCTAAACCATAAAATGGAATGTTGTGCAGAGAATGCAGTTGGCAAAACATCTCTTTCATCGGTGAAAAACGGTAGCCACCTTTCAAATTACACCCCTTTTCCTGGAAATCCGCAGCAAACAAATGTGGGTGCTGATAGTGGGATGGGCCCCTGGTGTTTCCATCAGTCACCTGGGGACCAATGGTTAATTCCTGTGATGACTCCTTCGGAAGGGCTGGTCTACAAGCCATATCCTGGGCCTGGATTCACAGGAACAGGTTATGGAGGATGTGGCCCTGCTCCTTTAGGTGGTGCTTTTATGAATCCTGCCTATGGAATCCAAACTTCTCATCAAGGAGACACTCCTCCTGGCAGTCATGGTTACTTCCCTCCATATGGCATGCCATTTATGAATGCAGCAATGTCAGAGTCAGCTGTTGAACAAGTGAACCAGTTTTCTGCATTAGGTTCTCGTGGTCATTTATCCAGAGGGGAAGGCAATCTTAACACAAACAATCAAAGCTCTTGTAATTTACCAGTTCAGAAGAATGGAGCAATGTCTCATGCCCTGAAATATCAGACATCTAAGGACTTTGATTTGCAGGGTAGTACAGCAAGTAGTCCTGGTGAAATGGCACAAGGATTAAGCACAGGGCAACATGCCGAAGGAAGAGACGTACTTCCCCTTTTCCCTATGGTTTCTGCAGAACCAGAGTCTGCTCCTCAGTCCCTTGAAACCGGTCAGCAAACTCGAGTAATCAAAGTGGTGCCTCATAATCGAAGATCTGCAACTGAATCAGCAGCTAGAATTTTTAAATCGATTCAAGAAGAAAGAAAACAGTATGACTCGGTGTAG 2100 0.4367 MKRGKDDEKVMGPMFPRLHVNDTERGGPRAPPRNKMALYEQFSIPSQRFNSGVLPLNPNISSNTVPPASSSQGTVPERNHVFPVHLPPQNPIRRAEKCISRQSEGANLSASLEQRKKIDEDDFRVPVYIHSRIGQCNNKSVESFDAKKLTPTGFRYFGGSVAGQSDCERDPKQFGSSLVNMRKDVRSEIDGLPQVSTRKEHPLMSVTSISTGENIDTVKHAKVTPNQEFQDCHVSKQNRLRQGDACLRHDCGVASQSNDIGHNGCLVESARETDKGNAPTVNKISPAEAINDTRHHGTRTGSSIQRGNLNKSDNASKISMVENLSTAKISPDDVVGIIGQKHFWKARKAIATQQRVFAVQVFELHRLIKVQQLIAGSPDILVEDGTFLGKSPAKESTPKKLPLEYVVKPRQQNLKHKDDSEKLNHKMECCAENAVGKTSLSSVKNGSHLSNYTPFPGNPQQTNVGADSGMGPWCFHQSPGDQWLIPVMTPSEGLVYKPYPGPGFTGTGYGGCGPAPLGGAFMNPAYGIQTSHQGDTPPGSHGYFPPYGMPFMNAAMSESAVEQVNQFSALGSRGHLSRGEGNLNTNNQSSCNLPVQKNGAMSHALKYQTSKDFDLQGSTASSPGEMAQGLSTGQHAEGRDVLPLFPMVSAEPESAPQSLETGQQTRVIKVVPHNRRSATESAARIFKSIQEERKQYDSV 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01755 699 MobiDBLite consensus disorder prediction 572 595 - -
Cca03g01755 699 MobiDBLite consensus disorder prediction 614 635 - -
Cca03g01755 699 PANTHER PROTEIN EARLY FLOWERING 3 1 699 IPR039319 GO:2000028
Cca03g01755 699 MobiDBLite consensus disorder prediction 614 629 - -
Cca03g01755 699 MobiDBLite consensus disorder prediction 293 313 - -
Cca03g01755 699 MobiDBLite consensus disorder prediction 296 313 - -
Cca03g01755 699 MobiDBLite consensus disorder prediction 1 33 - -
Cca03g01755 699 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 1 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01755 Cca-Chr3 36644089 36649012 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01755 K12125 - gmx:100793561 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01755 03 36644089 36649012 Cca03g01755 03 36644089 36649012 ECH
Cca03g01755 03 36644089 36649012 Cca05g00863 05 23435958 23441218 ECH