Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03118 ATGGCGAAGGAAATTAAGCAAAAAAAATGGGAAGGTAAAGACACCGTTGAGATAAGAGGCGTGGATGGGGAAATAGTGTGGCACGTGTTAGAGGATTTTTGTAACCTTCACAAATGGATTCCAATAGATACATGTTACAAAATTGGGGGAATTGAAGGTCAACCTGGTCTAATCCGTTATTGTGCTTCCGCAAAAAAAGGTGTCACTAAAGATGCTGAGCCAACAATTAAGTGGTTCAAAGAGAAGTTGTTGAAAATTGATCCCATCCAACGTTGTTTGTCCTATGAAATTGTCGATAACAACATGGGATTTAAGAATTATGTAGCTATAATGAAAGTATTGCCATTGCAAATCAACGGTGGTGATGATGGTAAAAGTGAAGGGTGCATGATTGAATGGTCGTGTGTTTGTGATCCAATTGAAGGGTGGAGTTTGCAAGATTTGAATAATTACATTGGGTCTTTTCTCAAGAGCTTGGGAAATAAGATTCAACTTGCATACTCTTATTCACCTAGTAAAATTTAG 525 0.3771 MAKEIKQKKWEGKDTVEIRGVDGEIVWHVLEDFCNLHKWIPIDTCYKIGGIEGQPGLIRYCASAKKGVTKDAEPTIKWFKEKLLKIDPIQRCLSYEIVDNNMGFKNYVAIMKVLPLQINGGDDGKSEGCMIEWSCVCDPIEGWSLQDLNNYIGSFLKSLGNKIQLAYSYSPSKI 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03118 174 Pfam Polyketide cyclase / dehydrase and lipid transport 13 155 IPR019587 -
Car05g03118 174 Gene3D - 3 169 IPR023393 -
Car05g03118 174 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 7 166 - -
Car05g03118 174 SUPERFAMILY Bet v1-like 22 148 - -
Car05g03118 174 CDD PYR_PYL_RCAR_like 10 158 - -
Car05g03118 174 PANTHER - 7 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03118 Car-Chr5 75980059 75980784 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03118 - - gmx:100798368 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03118 05 75980059 75980784 Car05g03118 05 75980059 75980784 ECH
Car05g03118 05 75980059 75980784 Car04g03344 04 61911738 61917647 ECH