Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02816 ATGAAGAAGGAAGCTGATAAAGACAAAATCGAAGACGATCCGAAACTTTGGGGTGTTTTACTCTTCGGTTTAATTGGCGCCACCGCCACTACCCTCGTTTTCGGTCAGCTTCGGAAAACTGTTGAATGGTTCTCTGTTCAGGTCACAGACCCATGTATCGCTTTTGTGCTTGCCCCATGTCTCGCCTCCTCCTTGACACTAATTTTGGTTGCAGTTGCCTGCTCTGCTTCCACCATTTCTGCTGCTCTCCTTGTGTACTCTGTAAAAAAGGTTGATCTTGGCAGGGAGCGAATAAGGCGAATGCAAAACGTGTTTAACAGAGAAAGGAATAAGTACAAAAGAGGCTACGAAAGCTGGAGGGAACATGGCGCTGGTGCATATCATCAGCATTTCCAAAGAGAAGATTGGTATTGGAAGGCTGATACTTCACACAGAGACAGGAGGACTAATTATCGAGAAACTCCAAGAGAGAGTGGAAACTATGCATTGTCACATCACTACTCAGTTTTGGGTCTTGACAGGTTTAGGAAAACACCATATTCAGATGCTGAGATTAAGTCAGCATTTAGGACAAAGGCAAAGGAGTATCATCCTGATCAGAACCAGGATAATAAAGACGTTGCTGAAGCTAAGTTCAAAGAGGACTCGGAACAATGTGAGAATTTGACACTTAACAGACGTAAGTAA 687 0.4381 MKKEADKDKIEDDPKLWGVLLFGLIGATATTLVFGQLRKTVEWFSVQVTDPCIAFVLAPCLASSLTLILVAVACSASTISAALLVYSVKKVDLGRERIRRMQNVFNRERNKYKRGYESWREHGAGAYHQHFQREDWYWKADTSHRDRRTNYRETPRESGNYALSHHYSVLGLDRFRKTPYSDAEIKSAFRTKAKEYHPDQNQDNKDVAEAKFKEDSEQCENLTLNRRK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02816 228 Pfam DnaJ domain 166 223 IPR001623 -
Car05g02816 228 Gene3D DnaJ domain 157 228 IPR036869 -
Car05g02816 228 CDD DnaJ 166 214 IPR001623 -
Car05g02816 228 ProSiteProfiles dnaJ domain profile. 165 228 IPR001623 -
Car05g02816 228 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 96 226 - -
Car05g02816 228 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 49 - -
Car05g02816 228 SUPERFAMILY Chaperone J-domain 164 222 IPR036869 -
Car05g02816 228 SMART dnaj_3 164 218 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02816 Car-Chr5 73226358 73231653 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02816 - - mtr:MTR_3g103530 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02816 05 73226358 73231653 Car05g02816 05 73226358 73231653 ECH
Car04g03349 04 61974153 61978119 Car05g02816 05 73226358 73231653 PCT