Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02813 ATGAAGTCCATCAATGACAGTAGTAACTCTGATGACAGAAACAACAATCATAACAACAATAACTGGTTGGGTTTTTCTCTCTCACCTCAACTGAAAATGGAggtttcttctgctcctcctccttctcatcatcatcatcattatcaacaacatcatcattaccatcatcaacatcAACCTTCTTCAGCTTCCAACACTGTTCCTACACCTTTCTATTTCTCCTCTTCTCACTTCAATAACTGTTATGAAAATGGTAACCTTCATTCACCTTTGACTGTTATGCCTCTTAAGTCAGATGGCTCACTTTGTATCATGGAAGCTCTTGGTAGATCACAACCACAAGTGATGGTGCCATCTTCATCTCCAAAACTAGAAGACTTTCTAGGCGGTGCAACAATGGGAACTCATGATGAATATGGTAGTAGTAGCCATGAAAGAGAAGCAATGGCTTTAAGCTTAGACAGTATTTACTACAATACCCAAAATGCAGATCCTCAACAACCTAATAGAGACCATTCTCTTGACCTTCTTTCAGATGATTCCTTTAGACAACAAAGCCACAACATCAATGTCCAGTCACATCCATATTATTCAGCTCTTCATTGTCATGGTATTTTTCAATCACAATTAGAGGAAGAACAAGAAACAACAAAGGCAACAAACCATGTTGCTGTTTGTAGTTCCCAAATGCCTCAAATAGCTGAAGAAGCCGAAGAAAGCATTGCTTGTTTCAAAAACTGGGAGCAACAAATGAACACTAACCTAGGAAATAATGGTGGAAATGGTGTTGGTTCTGTTGGTGAGTTACAATCTTTAAGCCTTTCTATGAGTCCTGGTTCTCAATCTAGTTGTGTTACAGCTCCTAGACAGATCTCACCTACTGGAACAGAATCAGTGGCTATGGATGTTAAAAAAAGAGGAGCTTCTAAAATGGGTCAGAAGCAACCTGTGCATAGGAAATCTATTGATACTTTTGGTCAAAGAACATCACAGTACAGAGGTGTCACTAGGCATAGATGGACTGGTAGATATGAAGCACATTTGTGGGATAACAGCTGCAAGAAGGAAGGACAAACTAGGAAAGGAAGACAAGTATATTTGGGTGGTTATGATATGGAAGAGAAAGCTGCAAGAGCTTATGATCAAGCAGCTCTCAAGTATTGGGGACCTTCAACTCATATAAACTTTCCCTTGGAAAATTACACAACACAGCTTGAGGAAATGAAGAACATGACTAGGCAGGAATATGTTGCTCATTTGAGAAGAAAAAGCAGTGGATTTTCTAGAGGTGCTTCAATGTACAGAGGAGTGACAAGACACCACCAACATGGTAGGTGGCAAGCAAGAATAGGAAGAGTTGCTGGTAACAAGGATCTTTATCTTGGAACATTCAGCACTCAAGAGGAAGCAGCAGAAGCATATGATGTAGCTGCAATCAAATTCCGGGGATCAAATGCAGTGACAAATTTCGACATATCTAGATACGATGTCGAAAGGATCATGGCTAGCAATACTCTTCTTGCCGGCGAACAGGCAAGAAGAAACAAAGATAACGATCCGAGAACCGAAGTTGTGGAATACAATGGTACTAATGTATCAAGCCAGAACAGTGTTGAAGCGGCTCAACAGCGAAAAAACAATGAAAATGAATCAAAGTGGAAGATGGTTTTGTGTAATAATCATCCACAACAGGAACAACAAAATCAACAATCAAATACTTGTGACCAAAAAATTGGAAATTTTAAGAATTCTGATTTTTCTATGTCATTACAAGACATTGTTGGGATTGATTCTGGTCAGCACATGTTGGATGATTCAAGCAAGAATATTGGAAATCATTTTTCAAATCCGTCTTCACTTGTGACAAGTTTAAGCTCTTCAAGAGAAGCTAGTCCTGACAAAACAGCTGCTTCATTACTCTTTCCAAAGCCTTCAATGGAAACAAAGATTACTAAtggtgttggtgttggtgttagttcttggttttCTTCACAAATGAGGCCAAATGGTTCTATGAATTTGTCTCATTTGCCACTTTTTGCTGCATGGAATGATGCTTAG 2061 0.3707 MKSINDSSNSDDRNNNHNNNNWLGFSLSPQLKMEVSSAPPPSHHHHHYQQHHHYHHQHQPSSASNTVPTPFYFSSSHFNNCYENGNLHSPLTVMPLKSDGSLCIMEALGRSQPQVMVPSSSPKLEDFLGGATMGTHDEYGSSSHEREAMALSLDSIYYNTQNADPQQPNRDHSLDLLSDDSFRQQSHNINVQSHPYYSALHCHGIFQSQLEEEQETTKATNHVAVCSSQMPQIAEEAEESIACFKNWEQQMNTNLGNNGGNGVGSVGELQSLSLSMSPGSQSSCVTAPRQISPTGTESVAMDVKKRGASKMGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDQAALKYWGPSTHINFPLENYTTQLEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGSNAVTNFDISRYDVERIMASNTLLAGEQARRNKDNDPRTEVVEYNGTNVSSQNSVEAAQQRKNNENESKWKMVLCNNHPQQEQQNQQSNTCDQKIGNFKNSDFSMSLQDIVGIDSGQHMLDDSSKNIGNHFSNPSSLVTSLSSSREASPDKTAASLLFPKPSMETKITNGVGVGVSSWFSSQMRPNGSMNLSHLPLFAAWNDA 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02813 686 MobiDBLite consensus disorder prediction 1 35 - -
Car05g02813 686 CDD AP2 330 397 IPR001471 GO:0003700|GO:0006355
Car05g02813 686 MobiDBLite consensus disorder prediction 277 298 - -
Car05g02813 686 ProSiteProfiles AP2/ERF domain profile. 331 397 IPR001471 GO:0003700|GO:0006355
Car05g02813 686 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 18 684 - -
Car05g02813 686 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 18 684 - -
Car05g02813 686 SUPERFAMILY DNA-binding domain 330 399 IPR016177 GO:0003677
Car05g02813 686 MobiDBLite consensus disorder prediction 277 297 - -
Car05g02813 686 MobiDBLite consensus disorder prediction 1 65 - -
Car05g02813 686 SMART rav1_2 331 403 IPR001471 GO:0003700|GO:0006355
Car05g02813 686 SMART rav1_2 433 497 IPR001471 GO:0003700|GO:0006355
Car05g02813 686 SUPERFAMILY DNA-binding domain 432 493 IPR016177 GO:0003677
Car05g02813 686 MobiDBLite consensus disorder prediction 44 58 - -
Car05g02813 686 CDD AP2 432 493 IPR001471 GO:0003700|GO:0006355
Car05g02813 686 ProSiteProfiles AP2/ERF domain profile. 433 491 IPR001471 GO:0003700|GO:0006355
Car05g02813 686 Gene3D AP2/ERF domain 433 493 IPR036955 GO:0003700|GO:0006355
Car05g02813 686 Gene3D AP2/ERF domain 330 399 IPR036955 GO:0003700|GO:0006355
Car05g02813 686 Pfam AP2 domain 434 483 IPR001471 GO:0003700|GO:0006355
Car05g02813 686 Pfam AP2 domain 331 389 IPR001471 GO:0003700|GO:0006355
Car05g02813 686 PRINTS Ethylene responsive element binding protein signature 332 343 IPR001471 GO:0003700|GO:0006355
Car05g02813 686 PRINTS Ethylene responsive element binding protein signature 473 493 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02813 Car-Chr5 73177022 73180971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02813 1 517 AP2-EREBP Transcription Factor Family AT4G37750 51.906 1.47e-159 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Car05g02813 AP2 1.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02813 K09285 - gmx:100798179 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02813 05 73177022 73180971 Car05g02813 05 73177022 73180971 ECH
Car04g03357 04 62047767 62051953 Car05g02813 05 73177022 73180971 PCT