Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02791 ATGGAAAAGAACTTCAATTTTAACGATAATTCCAGTTCCGCTTTCAGTGACTGCAACAGCGACAGATCCGACGAATTCACCACTGCATCTTCACAAAACCGACGCCTATTAATGGCTTGCGCTTCCGATAATTCCGACGAACTCATTTGCCAGTTAGTTCTCGATCTCGACTCCTGTTCGATTGAACAACAAAAACAAGCCACAACGGAAATCAGAATACTCGCCAAAAGTAATTCCGATAACCGTCTCAGAATCGCGAAAGCCGGCGCTATAAAGCCGTTAATTTCGCTTCTATCTTCGCCGGCGCCGGACCTTCAGCTTCAAGAATATGCCATCACAGCGATTTTAAATCTCTCACTCTGCGACGAGAATAAAGACGTTATCGCTTCGTCCGGAGCGATTAAACCTATGGTTCGAGCACTGAAAACAGGAACTCCAACGGCGAAGGAAAACGCGGCGTGTGCTCTGCTTCGTCTCGCGCAGACAGAAGAGAACAAAGCGGAAATAGGAAGGTACGGAGGAATTCCGCCGTTGGTGAACCTTTTAGAAAACGGCGGAATCCGAGGGAAGAAGGACGCGTCGACGGCGCTGTATTCGCTATGCTCGGTGAAAGAGAATAAAATTAGAGCCTTGAAGGCTGGAATCATGAAGCCGTTAGTGGAATTGATGGCAGATTTAGGTTCTAACATGGTGGATAAGTCGGCGTATGTGTTGAGCGTTCTGGTGACAATGATGGAGGCGAGAACGGCGTTGGTGGAGGAAGGAGGTATACCTGTGTTGGTGGAAATAGTGGAGGTAGGAACGCAGAGACAGAAGGAAATTGCGGTGGTGATTTTATTGGAGATTTGTGAAGAGAATGTGAGTAATATTAAAATGGTGTGTCGTGAAGGAGCCATTCCTCCATTGGTTGCTCTTTCTCAGTCCGGTACCAATCGCGCCAAGCAAAAGGCGGAGACACTTATAAAGCTTCTACGGCAACCAAGATCCGGCAACGCCGCTGCACGTGCCTCATAA 1014 0.4783 MEKNFNFNDNSSSAFSDCNSDRSDEFTTASSQNRRLLMACASDNSDELICQLVLDLDSCSIEQQKQATTEIRILAKSNSDNRLRIAKAGAIKPLISLLSSPAPDLQLQEYAITAILNLSLCDENKDVIASSGAIKPMVRALKTGTPTAKENAACALLRLAQTEENKAEIGRYGGIPPLVNLLENGGIRGKKDASTALYSLCSVKENKIRALKAGIMKPLVELMADLGSNMVDKSAYVLSVLVTMMEARTALVEEGGIPVLVEIVEVGTQRQKEIAVVILLEICEENVSNIKMVCREGAIPPLVALSQSGTNRAKQKAETLIKLLRQPRSGNAAARAS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02791 337 MobiDBLite consensus disorder prediction 1 24 - -
Car05g02791 337 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE ISOFORM X1 9 332 - -
Car05g02791 337 Gene3D - 20 190 IPR011989 -
Car05g02791 337 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 89 133 IPR000225 GO:0005515
Car05g02791 337 PANTHER U BOX DOMAIN-CONTAINING 9 332 - -
Car05g02791 337 SMART arm_5 244 284 IPR000225 GO:0005515
Car05g02791 337 SMART arm_5 162 202 IPR000225 GO:0005515
Car05g02791 337 SMART arm_5 78 120 IPR000225 GO:0005515
Car05g02791 337 SMART arm_5 286 326 IPR000225 GO:0005515
Car05g02791 337 SMART arm_5 121 161 IPR000225 GO:0005515
Car05g02791 337 SMART arm_5 203 243 IPR000225 GO:0005515
Car05g02791 337 Gene3D - 191 337 IPR011989 -
Car05g02791 337 SUPERFAMILY ARM repeat 46 324 IPR016024 -
Car05g02791 337 Pfam Armadillo/beta-catenin-like repeat 163 202 IPR000225 GO:0005515
Car05g02791 337 Pfam Armadillo/beta-catenin-like repeat 78 119 IPR000225 GO:0005515
Car05g02791 337 Pfam Armadillo/beta-catenin-like repeat 122 160 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02791 Car-Chr5 72970341 72973705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02791 49 333 U-box Gene Family AT2G23140 49.474 2.55e-82 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02791 - - mnt:21388741 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03385 04 62402837 62405441 Car05g02791 05 72970341 72973705 PCT