Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03385 ATGGGAACCGAGAGTTACACTTACATGGGACGCAGTTTCAACGAATTCACAATCAACGACGATTCCAGTTCCTCTGCTTTCAGCGACTGTAACAGCGATAGATCCGGGGAATTCGCCACCACTTCTTCACAATCCCGACGACTCCTCATCTCCTGTGCTTCCGAAAACTCCGATGATTTCATCCGTCAACTTGTTTCCGATCTTCACTCTTCTTCAATCGAAGACCAGAAACAAGCCGCCATGGAAATTCGATTACTTGCTAAAAATAAACCAGAAAATCGAATCAAAATAGCAAAAGCCGGCGCAATTAAACCATTAATTTCACTCGTTTCTTCGCAAGACCTTCAACTTCAAGAATACGGCGTCACCGCGATTTTGAATCTCTCTTTATGCGACGAGAATAAAGAGCTAATAGCTTCTTCTGGAGCGATTAAGCCTCTAGTTAGAGCCTTAAACTCAGGAACTTCAACGGCGAAGGAGAACGCCGCGTGTGCGCTGCTTCGTCTATCGCAGGTGGAAGAGAACAAGGCGGCAATTGGAAGGTCCGGCGCCATTCCGTTACTAGTGAATCTTCTAGAAACAGGCGGAATCCGCGCTAAGAAAGACGCGTCGACGGCGCTGTACTCGCTGTGCTCAGTGAAGGAAAACAAGATGAGAGCCGTTAAAGCGGGAATCATGAAGGTTTTGGTTGAGTTGATGGCGGATTTTGAATCAAATATGGTGGATAAATCGGCGTACGTCGTGAGTGTGTTGGCGTCGGTGCCGGAGGCGAAGGTGGCGCTGGTGGAAGAAGGTGGCGTACCGGTGTTGGTGGAGATCGTTGAAGTTGGATCGCAGAGACAGAAAGAAATAGCGGCAGTTATTCTGTTACAGATTTGTGAGGATAGCGTGGCATATCGAACCATGGTGGCTCGTGAAGGTGCGATTCCTCCTTTGGTTGCTTTGACGCAGTCCGGTACCAATCGCGCAAAACAAAAGGCTGAGAAACTAATTGAGCTTCTGCGGCAACCAAGATCTACACGTAGTACATCAGAAATTATGATAGCATAA 1050 0.4762 MGTESYTYMGRSFNEFTINDDSSSSAFSDCNSDRSGEFATTSSQSRRLLISCASENSDDFIRQLVSDLHSSSIEDQKQAAMEIRLLAKNKPENRIKIAKAGAIKPLISLVSSQDLQLQEYGVTAILNLSLCDENKELIASSGAIKPLVRALNSGTSTAKENAACALLRLSQVEENKAAIGRSGAIPLLVNLLETGGIRAKKDASTALYSLCSVKENKMRAVKAGIMKVLVELMADFESNMVDKSAYVVSVLASVPEAKVALVEEGGVPVLVEIVEVGSQRQKEIAAVILLQICEDSVAYRTMVAREGAIPPLVALTQSGTNRAKQKAEKLIELLRQPRSTRSTSEIMIA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03385 349 Gene3D - 40 347 IPR011989 -
Car04g03385 349 SUPERFAMILY ARM repeat 57 333 IPR016024 -
Car04g03385 349 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 142 184 IPR000225 GO:0005515
Car04g03385 349 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 183 225 IPR000225 GO:0005515
Car04g03385 349 Pfam Armadillo/beta-catenin-like repeat 132 170 IPR000225 GO:0005515
Car04g03385 349 Pfam Armadillo/beta-catenin-like repeat 91 129 IPR000225 GO:0005515
Car04g03385 349 Pfam Armadillo/beta-catenin-like repeat 174 212 IPR000225 GO:0005515
Car04g03385 349 PANTHER U BOX DOMAIN-CONTAINING 5 343 - -
Car04g03385 349 SMART arm_5 213 253 IPR000225 GO:0005515
Car04g03385 349 SMART arm_5 131 171 IPR000225 GO:0005515
Car04g03385 349 SMART arm_5 90 130 IPR000225 GO:0005515
Car04g03385 349 SMART arm_5 296 336 IPR000225 GO:0005515
Car04g03385 349 SMART arm_5 172 212 IPR000225 GO:0005515
Car04g03385 349 SMART arm_5 254 294 IPR000225 GO:0005515
Car04g03385 349 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 101 143 IPR000225 GO:0005515
Car04g03385 349 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE ISOFORM X1 5 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03385 Car-Chr4 62402837 62405441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03385 42 338 U-box Gene Family AT2G23140 48.822 1.99e-84 266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03385 04 62402837 62405441 Car04g03385 04 62402837 62405441 ECH
Car04g03385 04 62402837 62405441 Car05g02791 05 72970341 72973705 PCT