Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03364 ATGTCCTTCCATGAAGAGAAAATACCGGTTCGGTTTGGGTGTCTTCCGGTTCACGAAACCATGTTCACACAAGGCGAATTAGAGGAGTTATTTTCCCTCATTAACCAACCGGTTGACCCAACCAGTCCAGGGTCCGGTTCACAAGGTTCAAACCAAGCGGTTTACTCAATACCCGAGAGAAAGCTAAGGAGAATGCAATCGAACCGGGAGTCGGCTAGGCGGTCTCGTTGGAGAAAGAAGCGCCACGTAGAGAACCTCACGAGCGATTTGAACCGGTTGAGATTGGAAAACCGGGAACTAAAAAACCGGCTTGGTTTGACCATGAACTATAATCTCCTTTTATCCACGGAGAATCAATGTCTAAAATCAGAATCAATGTCCCTTATAGTAACACTTTTGGATCTATATCGGACTTTAGAGACTATGATTTCACAATAG 438 0.4498 MSFHEEKIPVRFGCLPVHETMFTQGELEELFSLINQPVDPTSPGSGSQGSNQAVYSIPERKLRRMQSNRESARRSRWRKKRHVENLTSDLNRLRLENRELKNRLGLTMNYNLLLSTENQCLKSESMSLIVTLLDLYRTLETMISQ 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03364 145 Gene3D - 59 110 - -
Car04g03364 145 Coils Coil 83 103 - -
Car04g03364 145 Pfam bZIP transcription factor 60 105 IPR004827 GO:0003700|GO:0006355
Car04g03364 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 22 144 - -
Car04g03364 145 SUPERFAMILY Leucine zipper domain 60 114 IPR046347 GO:0003700|GO:0006355
Car04g03364 145 CDD bZIP_plant_GBF1 61 108 IPR045314 GO:0003700|GO:0006355
Car04g03364 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 58 104 IPR004827 GO:0003700|GO:0006355
Car04g03364 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 63 78 IPR004827 GO:0003700|GO:0006355
Car04g03364 145 PANTHER BZIP TRANSCRIPTION FACTOR 22 144 - -
Car04g03364 145 SMART brlzneu 56 120 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03364 Car-Chr4 62133828 62134754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03364 13 139 bZIP Transcription Factor Family AT3G49760 35.075 1.46e-17 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car04g03364 bZIP_1 7.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03364 - - gmx:102661984 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03364 04 62133828 62134754 Car05g02810 05 73136439 73137346 PCT