Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03361 ATGGCAAATAATTCACAACAACCCTCCGGTATTCAGTTTCGGCCAGTCATTCACGCGCAGCAAGGACAACCATTTGTTCCAATGACTTCACAACAATTTGGACATGCAGGGCATGCTGTTCCTTCATCTAATGTCGGGATGCCAGGTCAGCAATTGCAATATTCTCAATCAATGCAACAGATGGCTCCAAGACAAATTCAGCCTGGTCATCCTGGTTCGTCATCGCAGGGTATACCTATGCCATATATTCAAACAAATAGGCCTCTGACATCTGTTCCACAACATGCACAGCAAGCTGTTCCCCACGTAAGCAATCATATGCCCGGCTTGGCTGTTTCAGGAGCACCTCCTCAATCTTCATATACTTTCACACCATCTTATGGTCAGCAACAAGACAATGCTAATGCATTGCCCCAATACCAGCATCAACCTCAAATGCTTGCACCTCCTGCTGGACAACCTTGGCCGTCCTCAGTATCTCAGAGTGCTGCAGCTGTTACATCAGTACCGCCGGCTGGAGTACAATCTTCTGGTACTGCATCAACTGATGCTGCAACTAATACCACTAACCACAACTCCGCATCTGATTGGCAAGAGCATTCTTCTGCTGATGGGAGAAGATATTACTACAACAAGAGGACAAGGCAATCTAGTTGGGAAAAACCTTTGGAATTGATGTCACCTCTTGAGAGGGCTGACGCATCAACTGTCTGGAAAGAGTTCACTTCTTCAGATGGAAGAAAATATTATTACAACAAGGTTACTCAGCAATCAACATGGACAATACCAGAGGAATTGAAGTTGGCTCGTGAGCATGCACATAAAACTATTAGCCAGGGAACAGTGTCAGAAACAAGCGATACATCGAATGCTGCTGGCTCCTTTGCTGCAACACCAACAGCAGCTAATGCAGATAGCTTCAACGCTTTGACATCTAATGGTCTTGCTTCAAGCCCATCTTCTATTACACCAATTGCAGCCACTGATCATCAACAGTTGTTTTCTGGATTATCGGGGACCTCTGTTTCCCATTCGGTAGTTACTTCAAGCGCCACAGGAGTTGAACCAAGCCCTGTGGTAACTGTGAGCACTGCCCCTACAACAGTAGCTGGAAGCTCAGGAGTAGCAGCCAACTCACTTGATTCAAAAATTCCATCCATTGTTGAAAATCTAGCAACTCAAGATTCTACTACTTCTGTCAATGGAGCTCCTCTTCAAGATTTGGAGGAAGCCAAAAGAGGACTTCCTGTGGTTGGAAAAACTAATGTTACTCCTTCAGAGGAGAAAACCAATGATGGTGAAACATTGGTATATGCAAATAAGCTGGAAGCAAAAAATGCATTTAAAGCACTTCTGGAATCTGTGAGTGTTCAGTCTGATTGGACGTGGGAACAGGCAATGAGAGAAATCGTCAACGACAAAAGATATAATGCCCTGAAAACTCTTGGTGAGCGAAAACAAGCTTTCAATGAGTATTTGGGCCAGAGGAAGAAGCTAGAGGCTGAAGAGAGACGCATAAAGCAGAAAAAAGCCCGCGAAGAATTCACAAAGATGTTAGAAGAGTGCAAGGAGCTAACATCATCCACAAGATGGAGCAAAGCTATAAGCATGCTTGAAAGTGATGAGCGATTCAGTGCTGTTGAAAGACCAAGAGACCGGGAAGATTTATTTGAAAGCTACATGGTGGAACTTGAGAGAAAGGAAAAGGAAAATGCTGCAGAGGAACACCGACGGAATTTAGCTGAATATAGGAAATTTCTTCAGTCCTGTGATTATGTGAAGGTGAACAGTCATTGGCGAAAAATCCAAGATCGGTTAGAGGATGACGATAGGTACTTACAACTTGAAAAAATTGACCGCTTGCTTGTTTTCCAGGACTATATTCGTGACTTGGAGAAAGAGGAAGAGGAACAAAAAAAGATACAGAAGGAACGACTCCGTCGGGGTGAAAGGAAAAACCGTGATGCATTTCGCAAGTTGCTGGAAGAACATGTTGCTGATGGAGTTCTTACTGCTAAAACACAATGGCGAGATTATTGCTTGAAGGTAGTGAAGGAGTTGCCTCAATATCAAGCTGTTGCATCAAATACATCTGGTTCCACTCCAAAAGATTTATTTGAGGATGTTTTTGAAGATCTTGAAAAGCAGTATCACGAAGACAAATCACTCATAAAAGATACACTTAAGTCAGGAAAGATTACCGTAGTGACTACATCAGTATTTGAGGACTTCAAGTCTGTCGTATTAGAAGAAGCTGCTTGCCAAAAGATATCGGAAATCAATTTGAAGCTTTTATATGAAGAGTTATTAGAGAGAGCTAAGGAGAAGGAGGAGAAAGAAGCCAAGAAACGCCAACGCCTTGCTGATGACTTCACTAACGTGTTATATACATTAAAGGATATTACTACTACTTCAGAATGGGAGGATTGCAAGCCACTTTTTGAGGAGACACAAGAGTACAGGTCAATTGGTGATGAAAGCTACAGTAGAGAAATTTTTGAGGAATACATTACATACTTaaaggaaaaagctaaagagaaggaacgcaaacgtgaagaggaaaagGCCAAGAAGGAGAGAGAAAAAGAAGAGAAAGAGAAACGAAAAGAGAAAGAGAAAAAAGAGAAGGACAGAGAACGTGAGAAAGAAAAGTCTAAGGAACGACATAAGAAAGATGAATCAGATAGCGATAATCAAGACATGACCGACAGCCATGGTTATAGAGAGGAGAAGAAAAAAGAAAAGGATAAGGAAAGAAAACATCGGAGAAGGCATCAGAGCAGTATAGAGGATGGCGATTCTGAAAAGGACGAGAAGGAAGAGTCTAGAAAATCCCGAAGACATGGAAGTGATCGCAAGAAGTCTAGAAAGCATGCAAACTCTCCTGAATCAGATAATGAAAGTCGGCATAAAAGACACAAGAGGGAGCACTGGGATAGTTCCAGGAGAACTGGATGGCACGAGGAGCTTGAAGATGGGGAGCTCGGCGATGATGGAGAGGTTTAG 3006 0.4208 MANNSQQPSGIQFRPVIHAQQGQPFVPMTSQQFGHAGHAVPSSNVGMPGQQLQYSQSMQQMAPRQIQPGHPGSSSQGIPMPYIQTNRPLTSVPQHAQQAVPHVSNHMPGLAVSGAPPQSSYTFTPSYGQQQDNANALPQYQHQPQMLAPPAGQPWPSSVSQSAAAVTSVPPAGVQSSGTASTDAATNTTNHNSASDWQEHSSADGRRYYYNKRTRQSSWEKPLELMSPLERADASTVWKEFTSSDGRKYYYNKVTQQSTWTIPEELKLAREHAHKTISQGTVSETSDTSNAAGSFAATPTAANADSFNALTSNGLASSPSSITPIAATDHQQLFSGLSGTSVSHSVVTSSATGVEPSPVVTVSTAPTTVAGSSGVAANSLDSKIPSIVENLATQDSTTSVNGAPLQDLEEAKRGLPVVGKTNVTPSEEKTNDGETLVYANKLEAKNAFKALLESVSVQSDWTWEQAMREIVNDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRIKQKKAREEFTKMLEECKELTSSTRWSKAISMLESDERFSAVERPRDREDLFESYMVELERKEKENAAEEHRRNLAEYRKFLQSCDYVKVNSHWRKIQDRLEDDDRYLQLEKIDRLLVFQDYIRDLEKEEEEQKKIQKERLRRGERKNRDAFRKLLEEHVADGVLTAKTQWRDYCLKVVKELPQYQAVASNTSGSTPKDLFEDVFEDLEKQYHEDKSLIKDTLKSGKITVVTTSVFEDFKSVVLEEAACQKISEINLKLLYEELLERAKEKEEKEAKKRQRLADDFTNVLYTLKDITTTSEWEDCKPLFEETQEYRSIGDESYSREIFEEYITYLKEKAKEKERKREEEKAKKEREKEEKEKRKEKEKKEKDREREKEKSKERHKKDESDSDNQDMTDSHGYREEKKKEKDKERKHRRRHQSSIEDGDSEKDEKEESRKSRRHGSDRKKSRKHANSPESDNESRHKRHKREHWDSSRRTGWHEELEDGELGDDGEV 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03361 1001 SMART FF_2 508 563 IPR002713 -
Car04g03361 1001 SMART FF_2 576 630 IPR002713 -
Car04g03361 1001 SMART FF_2 784 839 IPR002713 -
Car04g03361 1001 SMART FF_2 650 712 IPR002713 -
Car04g03361 1001 SMART FF_2 441 495 IPR002713 -
Car04g03361 1001 Gene3D FF domain 641 723 IPR036517 -
Car04g03361 1001 Gene3D FF domain 497 571 IPR036517 -
Car04g03361 1001 Gene3D FF domain 572 640 IPR036517 -
Car04g03361 1001 MobiDBLite consensus disorder prediction 845 916 - -
Car04g03361 1001 MobiDBLite consensus disorder prediction 145 201 - -
Car04g03361 1001 PANTHER PRE-MRNA-PROCESSING PROTEIN 40B 7 996 - -
Car04g03361 1001 SUPERFAMILY FF domain 785 846 IPR036517 -
Car04g03361 1001 MobiDBLite consensus disorder prediction 923 947 - -
Car04g03361 1001 MobiDBLite consensus disorder prediction 154 199 - -
Car04g03361 1001 CDD WW 238 265 IPR001202 GO:0005515
Car04g03361 1001 MobiDBLite consensus disorder prediction 956 990 - -
Car04g03361 1001 SUPERFAMILY FF domain 643 719 IPR036517 -
Car04g03361 1001 Coils Coil 624 652 - -
Car04g03361 1001 SUPERFAMILY WW domain 196 230 IPR036020 GO:0005515
Car04g03361 1001 SUPERFAMILY FF domain 568 637 IPR036517 -
Car04g03361 1001 MobiDBLite consensus disorder prediction 115 132 - -
Car04g03361 1001 Pfam FF domain 652 708 IPR002713 -
Car04g03361 1001 Pfam FF domain 579 627 IPR002713 -
Car04g03361 1001 Pfam FF domain 443 492 IPR002713 -
Car04g03361 1001 Pfam FF domain 510 560 IPR002713 -
Car04g03361 1001 ProSiteProfiles FF domain profile. 648 712 IPR002713 -
Car04g03361 1001 Pfam WW domain 238 263 IPR001202 GO:0005515
Car04g03361 1001 Pfam WW domain 195 222 IPR001202 GO:0005515
Car04g03361 1001 ProSitePatterns WW/rsp5/WWP domain signature. 238 263 IPR001202 GO:0005515
Car04g03361 1001 Coils Coil 557 586 - -
Car04g03361 1001 MobiDBLite consensus disorder prediction 113 132 - -
Car04g03361 1001 ProSitePatterns WW/rsp5/WWP domain signature. 197 222 IPR001202 GO:0005515
Car04g03361 1001 Coils Coil 759 790 - -
Car04g03361 1001 CDD WW 195 224 IPR001202 GO:0005515
Car04g03361 1001 Coils Coil 489 512 - -
Car04g03361 1001 SUPERFAMILY FF domain 500 570 IPR036517 -
Car04g03361 1001 Gene3D - 190 233 - -
Car04g03361 1001 Gene3D - 234 277 - -
Car04g03361 1001 Gene3D FF domain 779 852 IPR036517 -
Car04g03361 1001 Gene3D FF domain 441 496 IPR036517 -
Car04g03361 1001 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 7 996 IPR039726 GO:0045292
Car04g03361 1001 ProSiteProfiles FF domain profile. 441 495 IPR002713 -
Car04g03361 1001 SMART ww_5 233 265 IPR001202 GO:0005515
Car04g03361 1001 SMART ww_5 192 224 IPR001202 GO:0005515
Car04g03361 1001 ProSiteProfiles WW/rsp5/WWP domain profile. 191 224 IPR001202 GO:0005515
Car04g03361 1001 ProSiteProfiles FF domain profile. 508 563 IPR002713 -
Car04g03361 1001 SUPERFAMILY FF domain 434 495 IPR036517 -
Car04g03361 1001 MobiDBLite consensus disorder prediction 845 1001 - -
Car04g03361 1001 SUPERFAMILY WW domain 225 266 IPR036020 GO:0005515
Car04g03361 1001 ProSiteProfiles FF domain profile. 576 630 IPR002713 -
Car04g03361 1001 Coils Coil 837 889 - -
Car04g03361 1001 ProSiteProfiles WW/rsp5/WWP domain profile. 232 265 IPR001202 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03361 Car-Chr4 62104066 62116531 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03361 K12821 - gmx:100806019 1380.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03361 04 62104066 62116531 Car04g03361 04 62104066 62116531 ECH