Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03357 ATGAAATCTATGAATGATAGCAACATTGATGACGAACACAATCATAACTGGTTGGAATTTTCTCTCTCACCCCACATGAAAATGGATCATCATTACTATCATGAAAACCAACAACCTTCTTCTTCTCTTCTTGTTCCCTCAAACTTCTACATGTCACCTTCTTCAATATGTCATGGTTTTGGAGAAAACACTTCCTTTCATCATTCTTCTTTGTCTATGATGCCACTTATATCTCATGAATCACTTTGCATCATGGATTCTTTCACCACATCACAAACACAACAAGTGATGCTGCCAACTTCATCTCCAAAACTAGAAGATTTCTTAGGTAGTGCAACTATGGAAAATCATCATGAATATGAAGGAAATGAAAGAGAAAGAATGGATTTAAGCTTAGACAGCAATATTTACTATAACAATAATAATGAAGGACAAGAACATTCTTCATATTATTCAGAACTTGCATGTCATGGAATAATGTATCATGAATCATTGTTGGAAGAGGAAAACATTTCTTGCTTCATGAATAGTGTTGGTAGCAATAATATTGAAGATTGTGTTGGAAAAGTTAATGATGGTTGTGGTGAGTTAAAATCTTTAAGCCTTTCAATGAGTCCTGGCTCTCAATCAAGTTGTATCACTGTTCCAAGTCATGATGATTCAATGGCTGTTAATGTTGAAGCTAAAAAGAGAGGGAATGTTAAGGTTGGTAAGAAGCAATCTGTTCATAGAAAATCTATTGATACATTTGGTCAGAGAACTTCTCAATACAGAGGAGTTACAAGGCATAGATGGACCGGTAGATATGAAGCACATTTATGGGACAACAGTTGCAAGAAGGAAGGGCAAACAAGGAAAGGAAGACAAGTTTATTTGGGTGGCTATGATATGGAAGTGAAAGCTGCAAAAGCATATGATCTTGCTGCTCTAAAGTATTGGGGACCTTCAACACATACTAACTTTTCGCTAGAAAATTACCAAAATGAACTTGAAGAGATGGATAACATGAGTAGGCAGGAATTTGTTGCCCACTTGAGAAGAAAGAGTAGTGGGTTTTCAAGGGGTGCATCAATCTATAGAGGAGTGACAAGGCACCACCAACATGGTAGATGGCAAGCTAGAATAGGCAGAGTTGCAGGAAATAGGGACCTTTATCTTGGGACATTTAGCACACAAGAGGAAGCAGCTGAAGCATATGATGTAGCTGCAATTAAATTCCGTGGCCTAAATGCAGTGACAAACTTTGTGATATCAAAATACAATGTTGAAAAAATCATGGCTAGCAACACACTTCTTGTTGGTGAACAAGCTAGAAGAACAAAACAAATTAAGGATACTAGTGAACCAAAAACCAATGCCAAAAGTCCAATTACAAATAGTGAAGAAAAAATTGAAGGTGGGAACCAAAATATTGAAAATGGTTGGAATATGTCCCCACAACAAGAGTCAAATACATGTGACCAAAAAACTGTAAAGTGTGGAAATTTTAGAAATTCTACTTTCTCTATGTCCCTACAAGATATCATTGGGATTGATTCAATAGGATCTAGCCAAGTTATGGTAGATGATTCTCCCAAGATGATAAGGACTCATTTTTCAAACTCATCTTCACTTGTGACTAGTTTAAGTAACTCAAGAGAATGCAGCCCTGACAACAAAAGTACTGGCCCCACAATGCTTTTTCCTAAACCTCCAATTGGGTCAAAAAATTTGAACCCTATTGTTACTACTAGTGTTACCTCATTGATTCCCTCAATGTCTTATTTGCCAGTTTTTGCTCCTTGGAGTGATACTTAG 1797 0.3667 MKSMNDSNIDDEHNHNWLEFSLSPHMKMDHHYYHENQQPSSSLLVPSNFYMSPSSICHGFGENTSFHHSSLSMMPLISHESLCIMDSFTTSQTQQVMLPTSSPKLEDFLGSATMENHHEYEGNERERMDLSLDSNIYYNNNNEGQEHSSYYSELACHGIMYHESLLEEENISCFMNSVGSNNIEDCVGKVNDGCGELKSLSLSMSPGSQSSCITVPSHDDSMAVNVEAKKRGNVKVGKKQSVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEVKAAKAYDLAALKYWGPSTHTNFSLENYQNELEEMDNMSRQEFVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNRDLYLGTFSTQEEAAEAYDVAAIKFRGLNAVTNFVISKYNVEKIMASNTLLVGEQARRTKQIKDTSEPKTNAKSPITNSEEKIEGGNQNIENGWNMSPQQESNTCDQKTVKCGNFRNSTFSMSLQDIIGIDSIGSSQVMVDDSPKMIRTHFSNSSSLVTSLSNSRECSPDNKSTGPTMLFPKPPIGSKNLNPIVTTSVTSLIPSMSYLPVFAPWSDT 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03357 598 MobiDBLite consensus disorder prediction 541 564 - -
Car04g03357 598 SUPERFAMILY DNA-binding domain 357 417 IPR016177 GO:0003677
Car04g03357 598 PRINTS Ethylene responsive element binding protein signature 257 268 IPR001471 GO:0003700|GO:0006355
Car04g03357 598 PRINTS Ethylene responsive element binding protein signature 398 418 IPR001471 GO:0003700|GO:0006355
Car04g03357 598 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13 154 - -
Car04g03357 598 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 166 595 - -
Car04g03357 598 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 13 154 - -
Car04g03357 598 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 166 595 - -
Car04g03357 598 Gene3D AP2/ERF domain 255 324 IPR036955 GO:0003700|GO:0006355
Car04g03357 598 Gene3D AP2/ERF domain 358 417 IPR036955 GO:0003700|GO:0006355
Car04g03357 598 MobiDBLite consensus disorder prediction 440 461 - -
Car04g03357 598 CDD AP2 357 415 IPR001471 GO:0003700|GO:0006355
Car04g03357 598 ProSiteProfiles AP2/ERF domain profile. 358 416 IPR001471 GO:0003700|GO:0006355
Car04g03357 598 Pfam AP2 domain 256 314 IPR001471 GO:0003700|GO:0006355
Car04g03357 598 Pfam AP2 domain 358 408 IPR001471 GO:0003700|GO:0006355
Car04g03357 598 SUPERFAMILY DNA-binding domain 255 323 IPR016177 GO:0003677
Car04g03357 598 SMART rav1_2 358 422 IPR001471 GO:0003700|GO:0006355
Car04g03357 598 SMART rav1_2 256 328 IPR001471 GO:0003700|GO:0006355
Car04g03357 598 ProSiteProfiles AP2/ERF domain profile. 256 322 IPR001471 GO:0003700|GO:0006355
Car04g03357 598 CDD AP2 255 321 IPR001471 GO:0003700|GO:0006355
Car04g03357 598 MobiDBLite consensus disorder prediction 541 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03357 Car-Chr4 62047767 62051953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03357 1 439 AP2-EREBP Transcription Factor Family AT4G37750 54.601 4.07e-149 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Car04g03357 AP2 3.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03357 K09285 - gmx:100798179 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03357 04 62047767 62051953 Car04g03357 04 62047767 62051953 ECH
Car04g03357 04 62047767 62051953 Car05g02813 05 73177022 73180971 PCT