Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03349 ATGAAGGAAGATGAAGGTGATAACAAAGAGAAAGTTCAAGATATCAAGCTTTGGGGAGTTTTTCTCTTCGGCTTAATTGGCGCTACCGCCACTACCTTCGCCCTGTCCAGGTCGTCGAAAGGAGGGACTGGCAGTTCTTTTCGATCAGCTTTTCAAGAAGAAGCATGGAAGAGATACAATAAGCGATTGCAAGAGGAGTATGAGGAGGAGATGGAAAAAGTGGAAAGAATACGTCGCATGCAAAATGTGTTTAATAGAGAAAGGAATAAGTTTAGAAGAAATTTTGAGAACTGGAAGGAAAATGGTCCCGGTGCATATCATCAGCATTTCCAAAGAGAAGATTGGTATTGGAAGGCTGAACAAACCTACAAAGACCAGTGGAATAATTACCGAGACACTCCAAGGGAAAATGGAAGCATAAATTACCCATTATTATCACACCACTACTCAGTTTTGGGTCTTGACAGGTTTAGATCGACACCGTATACAGATGCTGAGATTAAGACAGCATTTAGGACCAAGGCAAAGCAGTATCATCCTGACCAGAACATGGAGGATAGAGAGGCTGCTGAGGCTAAGTTCAAAGAAGTAATGGGTTCATATGAGGCCATACAAAAAGAAAGAAAGCATCATAATCTGTAA 642 0.4143 MKEDEGDNKEKVQDIKLWGVFLFGLIGATATTFALSRSSKGGTGSSFRSAFQEEAWKRYNKRLQEEYEEEMEKVERIRRMQNVFNRERNKFRRNFENWKENGPGAYHQHFQREDWYWKAEQTYKDQWNNYRDTPRENGSINYPLLSHHYSVLGLDRFRSTPYTDAEIKTAFRTKAKQYHPDQNMEDREAAEAKFKEVMGSYEAIQKERKHHNL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03349 213 PANTHER HEAT SHOCK PROTEIN-BINDING PROTEIN 1 213 - -
Car04g03349 213 CDD DnaJ 148 197 IPR001623 -
Car04g03349 213 Gene3D DnaJ domain 145 213 IPR036869 -
Car04g03349 213 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 213 - -
Car04g03349 213 PRINTS DnaJ domain signature 149 167 IPR001623 -
Car04g03349 213 PRINTS DnaJ domain signature 171 186 IPR001623 -
Car04g03349 213 PRINTS DnaJ domain signature 189 209 IPR001623 -
Car04g03349 213 ProSiteProfiles dnaJ domain profile. 147 209 IPR001623 -
Car04g03349 213 SUPERFAMILY Chaperone J-domain 143 210 IPR036869 -
Car04g03349 213 Coils Coil 53 80 - -
Car04g03349 213 Pfam DnaJ domain 148 210 IPR001623 -
Car04g03349 213 SMART dnaj_3 146 209 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03349 Car-Chr4 61974153 61978119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03349 140 210 Miscellaneous Gene Families AT5G49580 39.437 4.12e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03349 - - gmx:100804936 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03349 04 61974153 61978119 Car04g03349 04 61974153 61978119 ECH
Car04g03349 04 61974153 61978119 Car05g02816 05 73226358 73231653 PCT