Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03348 ATGCCAAGGAGAGCGGGGAATCCTTCTAGAAGGTTCGGTGATAGTAAATCGAAGACTTCGCCAGTTTTGTCAATTGGGCTTATAGTTGTGGGAGGTTTGTTTCTCATTGGTTACTTGTATAGGGGCTCAGGTTTGTTTCCTGTTTTTTTTTTTTTTACTTTAATGCAATATATCATGTGTGATTATTTGTGCAGTGGAGAGGTCCAACGTGCAATTCCTACTTTACAGAAAACATATGGAGATAGCATGCATAAAGTTTTGCATGTTGGTCCTGATACTTGCTATGTGGTCTCTAAATTGAAAAGGGAGGATGAAACTGAAGCCTGGGGTGTAGAACCATATGATATTGAGGATGTCGATAGTAGTTGCAAATCACTAATCCGTAGAGGCAGTGTGCGTGTGGCTGATGTCAAGTTTCCTCTTCCATATAGGCCAAAATCTTTCTCTCTTGTAATTGTTTCAGATACTCTGGATTACCTATCCCCCAGATACCTCAATAAAACTCTTCCAGATTTGGTGAGGGTATCATCTGATGGTTTAGTGATATTCACTGGTAAGAGCATTTTATGGAATCTTAGTTCCCATCAATGGGCCAAGATGAGGAGTTCATCCTGGTGGGTCAAGTTTTTCCTTCAAAATAACTTAGAGGAGAATGAAGCTGTTAATAAGAAGTTTGAGGAGGCTTCAACAAAGAGTTCATATGTTCCACGATGCCAGATATTCCACTTGAACGTATCAGAAAAGCATTCGTGGCCAGTTAGGGCGGTTACGATTACCCATTTGTGGTTGGCGCTTTGCATTTTCTTATTCGCTTCTTCAACTACTTTTCTGGCTCTGACTTTCATCGACGAATTGTTCAACCGTGTGCTGGTGATGGACATGGTTCAGATTTCTAATGACTTTCTTCATGGATTTGTTCCCTCTCCTAGCTGGATTTTAAAAGCATGGGAAACATCTGAGGATGAGATATTGGCTATTGGTGGCTTGGATGCTGTTGTTTTTGTAAGGATACTTGTGTTCAGTATTCGAGTTTTTTCCATTGCTGCTGTCATCTGCGTTATTCTAGTGCTTCCTGTGAATTACTATGGTACTGACAAAATGCATAAGCATATACCTCTGGAGTCACTGGATGTATTTACCATTGAGAATGTCAAACCAGGTTCAAGATGGCTTTGGGCTCATTGTCTTGCATTATACATCATAACACTTGCAGCTTGCACTCTTCTTTACTTTGAATACAGGAGCATTACTAAGTTGAGGCTTCTACATATTGTTGGATCTCCTCCAAGTCCAAGTCATTTTACTGTTCTTGTTCGATCAATTCCCTGGTCTGCAGACAAATCATATTGTGACACAGTGAACAAATTCTTCTCATATTACCATGAATCAACATATCTGTCCCACCAAATGATATATAAGTCTGGCAGAGTTCAGAAACTGAAGGACGAGGCTGAACATATGTGCAAGGTTCTTAGAGAAACTTCATTGGAAAAGACTTGTAAGGCAAGTTTTGTGCCATGTTGCTGTTCGGGAATATCCACAAATTCTTTTAAGAAGGATTCTAATGAGATGGGTGGTATTCATGGGAGCCCATGCTACACTGACATAGATACAAAGAAAAAGGAATCCCCAGCTGCTTTTGTGTTCTTTAAAAGTCGGTATGCTGCTCTTATGGCTGCTCAGACTCTGCAAACATCAAATCCTATGATATGGGTGACAGACATGGCTCCTGAACCACATGATGTTCACTGGTCCAATATTCGCATACGATATAGGCAACTTTGGATCCGTAAGATGGCTACACTTGCGGCTTCAATTGCCTTCATGCTGGCGTTCCTTATCCCTGTTACATTTGTACAAGGCTTGACTCAACTAGACAAGCTTCAGAAAATGTTCCCTTTTCTGACAGGGGTACTTAAAAAGGGATATGTGAACCAGCTGGTGACTGGTTACCTACCAAGTGTGATATTGGTTTTATTTTTGTGTGCAGTTCCACCGGTGATGATGCTATTTTCAACAGTTGAGGGTTCTATTTCCCGCAGTGGAAGGAAGAAAAGTGCATGTTGGAAAGTTTTGTACTTCACAATCTGGAATGTGTTTTTTGTTAATGTTTTTACTGGTTCTGTTATCAGCCAACTTTCAGTCTTTGATAGCATAACAGACCTGCCTGCACAGCTTGCAAAGGCAGTGCCAGCTCAGGCTACCTTCTTCACAACTTATGTTTTGTCATCTGGTTGGGCAAGTTTGGGATTTGAAGTTATGCAAATTTGTCCTCTTTTATACAATCTATTCCAGAGATTCCTGCTCAGGGTTAAGGATGATGATACACTTAATGGTGGCATATCTTTTCCATACCATACAGAAATTCCAAGGATCTTACTGTTTGGATTTCTTGGGTTCACCTGTTCAATTCTGGCACCTCTAATGCTTCCCTTCTTGTTGATCTACTTTTTCCTTGCTTACCTTGTTTACCGAAACCAGATTCTCAACGTGTACATTACAAAATACGACAGTGGGGGACAGTACTGGCCCATTGCACACAACACAACGGTCTTCTCTTTGCTAGTTGCTCAACTTATCGCGCTTGGGGTGTTTGGACTAAAACGCTCCACAGTTGCATCTGGATTTACCATTCCCTTGCTCATTGTTACCCTTCTTTTTCATCAGTATTGTAGACAACGATTTCTCCCAGTATTTAGAAGCCATTCAGCACAGATTCTTATTGACATGGATAAGAAAGATGAACAATCTGGAAAGATGGAAGGTATTTACGAACAAATACGATCAGCCTACAACCAGCCCAGTTTAGCACCACATGCCTCGAGCCAATCCGAATGCTCCAGCCCACAAGAGGACAAGGGGCTTGTAGATAACATTTCTGAAGATATAGAAAAAGGCAAAGAAATTGGTAAACAAGATAGACCAGCAGGGTCTATCCATCACACTTTGAGTTCGAGCTCGGATAAATCGGTACTTGGTGGAAATCAACTGAGTGAACCAGCTTATGATATTGAAAATTGA 3021 0.4095 MPRRAGNPSRRFGDSKSKTSPVLSIGLIVVGGLFLIGYLYRGSGLFPVFFFFTLMQYIMCDYLCSGEVQRAIPTLQKTYGDSMHKVLHVGPDTCYVVSKLKREDETEAWGVEPYDIEDVDSSCKSLIRRGSVRVADVKFPLPYRPKSFSLVIVSDTLDYLSPRYLNKTLPDLVRVSSDGLVIFTGKSILWNLSSHQWAKMRSSSWWVKFFLQNNLEENEAVNKKFEEASTKSSYVPRCQIFHLNVSEKHSWPVRAVTITHLWLALCIFLFASSTTFLALTFIDELFNRVLVMDMVQISNDFLHGFVPSPSWILKAWETSEDEILAIGGLDAVVFVRILVFSIRVFSIAAVICVILVLPVNYYGTDKMHKHIPLESLDVFTIENVKPGSRWLWAHCLALYIITLAACTLLYFEYRSITKLRLLHIVGSPPSPSHFTVLVRSIPWSADKSYCDTVNKFFSYYHESTYLSHQMIYKSGRVQKLKDEAEHMCKVLRETSLEKTCKASFVPCCCSGISTNSFKKDSNEMGGIHGSPCYTDIDTKKKESPAAFVFFKSRYAALMAAQTLQTSNPMIWVTDMAPEPHDVHWSNIRIRYRQLWIRKMATLAASIAFMLAFLIPVTFVQGLTQLDKLQKMFPFLTGVLKKGYVNQLVTGYLPSVILVLFLCAVPPVMMLFSTVEGSISRSGRKKSACWKVLYFTIWNVFFVNVFTGSVISQLSVFDSITDLPAQLAKAVPAQATFFTTYVLSSGWASLGFEVMQICPLLYNLFQRFLLRVKDDDTLNGGISFPYHTEIPRILLFGFLGFTCSILAPLMLPFLLIYFFLAYLVYRNQILNVYITKYDSGGQYWPIAHNTTVFSLLVAQLIALGVFGLKRSTVASGFTIPLLIVTLLFHQYCRQRFLPVFRSHSAQILIDMDKKDEQSGKMEGIYEQIRSAYNQPSLAPHASSQSECSSPQEDKGLVDNISEDIEKGKEIGKQDRPAGSIHHTLSSSSDKSVLGGNQLSEPAYDIEN 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03348 1006 Gene3D Vaccinia Virus protein VP39 74 248 IPR029063 -
Car04g03348 1006 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 264 974 IPR045122 GO:0005227
Car04g03348 1006 MobiDBLite consensus disorder prediction 934 1006 - -
Car04g03348 1006 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 264 974 - -
Car04g03348 1006 MobiDBLite consensus disorder prediction 934 954 - -
Car04g03348 1006 MobiDBLite consensus disorder prediction 978 994 - -
Car04g03348 1006 Coils Coil 211 231 - -
Car04g03348 1006 Pfam Late exocytosis, associated with Golgi transport 309 412 IPR032880 -
Car04g03348 1006 Pfam Calcium-dependent channel, 7TM region, putative phosphate 597 865 IPR003864 GO:0016020
Car04g03348 1006 Pfam Cytosolic domain of 10TM putative phosphate transporter 433 586 IPR027815 -
Car04g03348 1006 MobiDBLite consensus disorder prediction 955 975 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03348 Car-Chr4 61956184 61973605 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03348 K21989 - gmx:100796574 1131.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03348 04 61956184 61973605 Car04g03348 04 61956184 61973605 ECH