Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03341 ATGGATTTCATGAAAGTTTTCGATCAAACCGTTCGAGAAATAAAGCGAGAGGTGAATCTGAAGGTGCTTAAGGTTCCCGAAATCGAACAGAAGGTGTTGGATGCAACTGATGATGAACCTTGGGGTCCTCATGGTACTGTGCTGGCAGAGATTGCACAGGCTACCAAAAAATTTACTGAATGTCAGCTGGTTATGAATGTTCTTTGGACAAGATTGAGTGAAACTGGAAAGGATTGGCGATACGTATACAAGGCATTAGCTGTTATAGAGTATTTGGTATCACATGGTTCTGAACGTGCAGTTGATGACATTATAGAACATACTTTTCAGATCTCTGCACTCTCTAGTTTTGAGTATGTTGAGCCTAGCGGGAAGGATGTGGGGCTCAATGTAAGGAAGAAGGCAGAAAACATTGTGAACCTTTTGAATGATAGAGAAAAGATTCATGAAATCAGAAATAAAGCTGCTGCAAACCGTGACAAGTATGTTGGAGTTTCATCTAGTGGAATCACATACAAATCTGGAACAACCTCATTTAGTAGCGGCAGTTCACAAAGCAGTAATAAATATGGAGGTTTTGGTTCAAGTGGTGATAGGTTTAGTGATAGCTATGGAGACAAGGGGCGCTATGATGAAGGAAAAGTAGACAAAGATTACTCTGCAAAATCACGCCCTGGTGTCTCAAGTAGCGATCGAGAGAATTCCTTCAAGAAGGGTTCTGCACGGTCTGTCAGCAAAAGTCAGGAGAAAACATCATCTAGAGTATCAAAGTCATCTGCTAATGCAAGTTCAGTTCCTTCTCAAAGTTCAAGTGTACCTGCAAACAATACTGAGGATGACTTTGATGATTTTGATCCGAGAGGAACGTCTACTAAGACTTCAGCTGGAAGCTCAAACCAGGTTGATCTCTTTGGACAAGATTTGATTGGTGATCTCATGGATGCTCCGACATCTGTTTCTGTAGAAAAGGCAGCAACTAATAATGCGTCAGAGGTTGATCTCTTTGCAGATGCGGCATTTGTATCAGCATCACCACATGTGGACAAAGGAGCTAGTTCTCAACCACAGGGTGAAGTGGATCTTTTTTCTTCACAACCAGCCATTCCTTCAGTTTCACCAACAGTTGACTTGTTTTCCATTCCTGAACCAGTTGTGCAGCCTGAGAGCAAGTCGGAAAACTCTGGTCCTGTGAATAATAGCACTTTTGATCCCTTCGCTTCTGTTCCGCTTAATAATTTTGATGGATCTGATGTTTTTGGTGATTTTACTTCTCAATCTGATTCTGTATCGTCACAGCCCTCAACTAATGTTGTCACCGATGGTAGTCATGGTAATACGAGTGGTAAATCTTTAGCGAACTCTAATGTTTCACCTAAAAAGGATGCTTTTCAGGTGAAGTCTGGCATTTGGGCTGATTCACTAAGCCGTGGATTGATTGATCTCAATATATCTGCTCCCAAAAAAGTATCCCTTGTAGATGTTGGAATTGTAGGTGGATTAAGTGATGGATCTGATGAAAAGGAGAAAGGCCCTCCAACTACATTTTATATGGGGAGAGCTATGGGTTCAGGATCTGGTCTTGGTATGTCTGGTGTCACTCCTTCACAGACAACAGCCGGAGATGACATATTTTCAAACTTTGGCAGCCAAAATTATCAATTTGGTGGGTTCCAAAAGTAA 1680 0.4161 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDDEPWGPHGTVLAEIAQATKKFTECQLVMNVLWTRLSETGKDWRYVYKALAVIEYLVSHGSERAVDDIIEHTFQISALSSFEYVEPSGKDVGLNVRKKAENIVNLLNDREKIHEIRNKAAANRDKYVGVSSSGITYKSGTTSFSSGSSQSSNKYGGFGSSGDRFSDSYGDKGRYDEGKVDKDYSAKSRPGVSSSDRENSFKKGSARSVSKSQEKTSSRVSKSSANASSVPSQSSSVPANNTEDDFDDFDPRGTSTKTSAGSSNQVDLFGQDLIGDLMDAPTSVSVEKAATNNASEVDLFADAAFVSASPHVDKGASSQPQGEVDLFSSQPAIPSVSPTVDLFSIPEPVVQPESKSENSGPVNNSTFDPFASVPLNNFDGSDVFGDFTSQSDSVSSQPSTNVVTDGSHGNTSGKSLANSNVSPKKDAFQVKSGIWADSLSRGLIDLNISAPKKVSLVDVGIVGGLSDGSDEKEKGPPTTFYMGRAMGSGSGLGMSGVTPSQTTAGDDIFSNFGSQNYQFGGFQK 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03341 559 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Car04g03341 559 MobiDBLite consensus disorder prediction 424 456 - -
Car04g03341 559 MobiDBLite consensus disorder prediction 223 277 - -
Car04g03341 559 MobiDBLite consensus disorder prediction 202 221 - -
Car04g03341 559 MobiDBLite consensus disorder prediction 174 194 - -
Car04g03341 559 Gene3D - 19 165 IPR008942 -
Car04g03341 559 Pfam ENTH domain 27 147 IPR013809 -
Car04g03341 559 PANTHER CLATHRIN INTERACTOR EPSIN 1 1 550 IPR033521 GO:0006623|GO:0030276
Car04g03341 559 CDD ENTH 28 144 - -
Car04g03341 559 SUPERFAMILY ENTH/VHS domain 7 151 IPR008942 -
Car04g03341 559 SMART enth_2 26 152 IPR013809 -
Car04g03341 559 PANTHER EPSIN/ENT-RELATED 1 550 - -
Car04g03341 559 MobiDBLite consensus disorder prediction 174 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03341 Car-Chr4 61839255 61845214 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03341 K12471 - gmx:100789110 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03341 04 61839255 61845214 Car04g03341 04 61839255 61845214 ECH