Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03339 atgaaaagagggaagtgtgatgatgatgatgatgagaagGTAGTGGTGGGGCCCATGTTCCCAAGGCTCCATGTCAATGACACAACGGAGAAAGGAGGGCCAAGAGCACCACCGAGGAATAAGATGGCTCTTTATGAACACTTTAATGTTCCATTTCAAAGATTCAACAACAATTCTAATTCTTCTTCTAATTCACACCCTCTAACACCTTCCTCCACCTTGGGAAATGACCCAGAGAGAAGCTACATCGTCCCAGTTAATTTACCTTCACAAACGGCCACACAACGAGCTGAAAGTTATACTTCTCACCAATCTAATGAAGCAAACATGGACACTTTGTCTGCACAACTTGGACAGAGAAAAAAAGTAGATGGAGATGGCAGTCATGCATACGATCACTCAAGGATTGGTCAATCTAATAATAAAACAATGAAGAGTTTCAATGGGAAAAAACTCACTCCTGTGGGCGCCCGGAATTTTTGTTGTTCGGTAGCTGGGGAAAATGACGGTGACAAGGATCAAACTCAATTTGGCTCCCTACTTGTCAAAATGAGAAAAGATGTGAATAAAAGCAGGTTACATCAGGGCAATGCTTGCGTACAGCAGNNNNNNNNNNAGCAGGAATCTAATGACAGCGAACATGGTGATGGTCTCATTGACTCTGCGATGGATATTGATAATAGAAACAGTCTTGTGTTAAGAAGCTGCTCTCATTCGACAGTGGACCAAACCAGTGTACTTGAAGCTACCAATGATACTGAATATCATGATACCAACATTGACAGCCCGATGCAGAAAGGAAACTCAGAAGGAAGTGACGATCTTTCCAAGACCTCAACTCTAGAAAGTTTGTCAAGCATGGAACTTTCTCCTGACGGTATCGTACAGATACTAGGTCAAAAACATTTTTGGAAAGCAAGACGGAAAATTACCACTCAACAAAGAGTGTTTGCGGTCCAAGTGTTTGAATTGCACAGACTGATAAAGGTCCAACAGTTGATTGCTGGATCATCAGATCTTTTGTTCGAAGATGCTGCTATTTTGGGAAAATTTCCTCTGCAGGCATCTACTCCTAAAAGTATCTCATTGGAAGTTATTGTTGAACCTCCGACACAAAATCATAAACAGCAAGACCATTCTGAAAAGCTAAACCATAAATTGGAACATTCTGCTGAAAATGGAGTAGGGAAAACATCCTTTTCATCCCAAAAATATGGCAGTCATCTTTCCAATTACACTCCTTTTTATGGAAATCCACACCAGGAAAATGTCGTTTCCCGGAGTTTCAATCACTCACCTGGATATCAGTGGTTAATTCCTGTTATGTCTCCTTCTGAGGGGCTTGTCTACAAGCCATATCCCGGTCCTGGATTTACAGGACCAATGTACGGAGGATGTGGGCCATTTGGACCGGGTCCTCCTAACGGTGCGTTCATGAATCCTGCCTATGGAATTCCAGATTTTCATCAAGCAGTTGCTGTCTCACCCTTCATTCCTCCAGGCAGTTACGCCCACTTCCCTCCTCACTGCGTCCCAGCAATGAATCAATCAGCATCAGGCTCAGTTGTTGAACAGGCGAACCGGTTTGCTGCACAAGTTTCTCATGACTCAAATGGTAATTCATCTTTAGTTGGAGCCAGTTTTAACACTCATAATCAAAGCTCATGCAATTTGACAAATCAGAAAAATGGAGCCACATTACACATCACAAAATTTCAGCCATCTATTGAAAGAGAGTTACAAGGGATTCCAACAAGTAGACCTAATGAGAAGGAAATAAGAATAGAGAAATCTGCTGAAGGAAGAGATGCACTTTCTCCTTCTTTTACGGCTCCGTCAGTATCAGAGGAAGTCTTCCAATCTCTTGAAACCAAACAAAAACCGCAGGTAATTAGAGTTGTGCCACATAACCCACGATCTGCATCGGTATCAGCTGCTAGAATTTTTCAGTCGATCCAAGAAGAGAGAAAACAATATGATCTAGTCTAA 1989 0.4118 MKRGKCDDDDDEKVVVGPMFPRLHVNDTTEKGGPRAPPRNKMALYEHFNVPFQRFNNNSNSSSNSHPLTPSSTLGNDPERSYIVPVNLPSQTATQRAESYTSHQSNEANMDTLSAQLGQRKKVDGDGSHAYDHSRIGQSNNKTMKSFNGKKLTPVGARNFCCSVAGENDGDKDQTQFGSLLVKMRKDVNKSRLHQGNACVQQXXXXQESNDSEHGDGLIDSAMDIDNRNSLVLRSCSHSTVDQTSVLEATNDTEYHDTNIDSPMQKGNSEGSDDLSKTSTLESLSSMELSPDGIVQILGQKHFWKARRKITTQQRVFAVQVFELHRLIKVQQLIAGSSDLLFEDAAILGKFPLQASTPKSISLEVIVEPPTQNHKQQDHSEKLNHKLEHSAENGVGKTSFSSQKYGSHLSNYTPFYGNPHQENVVSRSFNHSPGYQWLIPVMSPSEGLVYKPYPGPGFTGPMYGGCGPFGPGPPNGAFMNPAYGIPDFHQAVAVSPFIPPGSYAHFPPHCVPAMNQSASGSVVEQANRFAAQVSHDSNGNSSLVGASFNTHNQSSCNLTNQKNGATLHITKFQPSIERELQGIPTSRPNEKEIRIEKSAEGRDALSPSFTAPSVSEEVFQSLETKQKPQVIRVVPHNPRSASVSAARIFQSIQEERKQYDLV 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03339 662 MobiDBLite consensus disorder prediction 1 41 - -
Car04g03339 662 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 1 190 - -
Car04g03339 662 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 189 662 - -
Car04g03339 662 MobiDBLite consensus disorder prediction 53 78 - -
Car04g03339 662 MobiDBLite consensus disorder prediction 85 116 - -
Car04g03339 662 MobiDBLite consensus disorder prediction 1 17 - -
Car04g03339 662 MobiDBLite consensus disorder prediction 252 283 - -
Car04g03339 662 PANTHER PROTEIN EARLY FLOWERING 3 1 190 IPR039319 GO:2000028
Car04g03339 662 PANTHER PROTEIN EARLY FLOWERING 3 189 662 IPR039319 GO:2000028
Car04g03339 662 MobiDBLite consensus disorder prediction 53 150 - -
Car04g03339 662 MobiDBLite consensus disorder prediction 133 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03339 Car-Chr4 61820690 61825908 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03339 K12125 - gmx:100788038 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03339 04 61820690 61825908 Car04g03339 04 61820690 61825908 ECH
Car05g02822 05 73302319 73307562 Car04g03339 04 61820690 61825908 ECH