Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00629 ATGCTCGAACCTCACAGGATCAGCTCCATAGATTGGAGGCCTTCCCCAGTAGTATCCCTAGCCACCAGCATCGACGGCTTGCAAGTCGCCGCAGGTCGCGAAGATGGGTCCTTGGAGGTTTGGCTTGTCTCTCCTGGTTCCGTGGGCTGGCACTGTCAGCTGACTATTCATGGAGACCCTAGCACAAGAGTTTCCTCACTTATTTGGTGCCCCGCTGGTTCAAGTGGCATGCCTTGCGGTCGATTATTCTCTTCTAACATAGATGGGTCAGTTTCCAAGTGGGACCTTTTCCACTTGAAGCAGAAGACCGTGCTTGATTCAGTTGGTGTATCAATCTGGCAAATGGCTGTGGCACCTTCTAACAGTGACTTAATTAATACTGAACAAAAGCCTGAGCCTTCAGGGAATGGATATTTGGACCATAAATTCAATGATTTGGGTGAACATGAAAGCAGTGaaagtgatgatgaagattCTGATTCATATGATCTTGATAAGCAATCTGTTGAGTGTCCTCATGTAGCAATTGGTTATGATGATGGATGTGTGCGAATATATGGCATCACTGACTCTGATGAATTTGTATACTTTAAATCCTTGCCTAGGGTCAGTGGACGAGTTTTAAGTGTGACTTGGAGTACAGATgcaaatttcatatattcagGAAGCAGTGATGGGTTAATAAGATGCTGGGATGCTAAATTGGGTCATGAAATTTATAGAATTACAGCTGGACTTGGAGGTTTGGGCAACATACATGATCTTTGCATATGGTCATTACTTTCCTTAAGGTCTGGGACACTTGTCAGTGCAGACAGCAGTGGTAGCGTCCAGTTTTGGGACAGCCAACATGGAACTCTCTTGCAAGCACATTCATTACACAAGGGAGAAGTAAACGCACTGGCAGCAGCACCAAGTCATAACTGGGTGTTCTCAGCTGGCTCTGATGGCCAGgtTATTCTTTATAAGCTCTCTGGTGAGTCAGTGACATCTGACAATATCAAGTCTCCAATGACAATGAAAAGATGGATCTACGTTGGTTATGTGAGGGCTCATACACACGATGTCAGGGCTTTAACTGTTGCTGTACCAATAAGTCGAGAAGATCCCTTACCTGATGAGAAGGTTAAAAGAATACGTCGTGAAGAAAAGCCAATTGACTTTAGTTACCACAAATGGGCCCATTTGGGGGTTCCCATGCTTATCTCAGCCGGTGATGACACAAAACTGTTTGCATATTCTGTTAAGGAGTTTACTAAGTTCTCTCCTCATGATATCTGTCCTGCACCTCAAAGAACACCCATTCAACTAGTGCCTAATAGTGTCTTCAATCAATTGCCAATGCTTTTAGTCCAGGCTTCCAATTGCTTGGATATTCTTTCTATAAGACTAAAAAATGGTGCCTTTCCTGATGTTACTCGTCGCACAACTGGGGGTCTTACAACTACTGATTTGCTTGCTCGAATTAAGAGTAAGGGATCTCGGAAGATAATTTGCAGCAGCATTGCTAATTCAGGGGTTTTTTTTGCTTACTCTGACCATGTGAAACCCAGtctatttgaattgaaaaggAGTGAAGTTGGGAAAAGTACTTGGAGTGTTTGTAAAAGGAAACTTCCTCCGCTACCGTTTGCTCATTCTATGATTTTTACTTCTGATTCCTCTCGGCTAATAGTGGCTGGACATGATAGAAGGATATATGTTGTAGATTTAGAAAGTTCAGAACTGGTACATACCTTTACGCCCTGTCGTGAGTTGTGTGATGAGGGATTACCACCAACTGAACCTCCTATAACAAGAATGTTTACCAGTTCTGATGGGCAATGGTTGACGGCTGTAAACTGCTTTggagatatatatgtattcaaTCTGGAGATACTAAGGCAGCATTGGTTTATCTCAAGATTAGATGGTGCCTCTGTCACTGCTGGAGGATTTCCACCCCAAAACAACAATATACTCATCGTTACAACTTCCTCAAATCAAGTATATGCATTTGATGTGGAGGCCAAACAGTTGGGAGAATGGTCAATGCGGCACACATTTCATCTTCCGAAGAGATACCAGGAATTTCCTGGCGAAGTTATTGGGCTCTCATTTGCCCCCTCTTCAAGTTCATCTTCGGTGGTTGTTTATAGTGCCAGGGCAATGTGCTTGATTGACTTTGGGTTGCCAGTGGAGCAAGATGATGGTGATGTACCAAATGCTCAAGATTCGATGACTAGAACTTTACAAAATCCTCTCAAGGGGAAACCTAAACGTAGAAagaactttgaattttttgcatTCAGGGATCctgttttattttctgctCATCTTTCAAAAGGTGCCTTCTTATTAATAGACAAGCCGTGGTTGGAAGTGGTTAAAGGCTTAGAAGCCCAGCCTGTCCACAGACATATTTTTGGAACGTA 2414 0.4171 MLEPHRISSIDWRPSPVVSLATSIDGLQVAAGREDGSLEVWLVSPGSVGWHCQLTIHGDPSTRVSSLIWCPAGSSGMPCGRLFSSNIDGSVSKWDLFHLKQKTVLDSVGVSIWQMAVAPSNSDLINTEQKPEPSGNGYLDHKFNDLGEHESSESDDEDSDSYDLDKQSVECPHVAIGYDDGCVRIYGITDSDEFVYFKSLPRVSGRVLSVTWSTDANFIYSGSSDGLIRCWDAKLGHEIYRITAGLGGLGNIHDLCIWSLLSLRSGTLVSADSSGSVQFWDSQHGTLLQAHSLHKGEVNALAAAPSHNWVFSAGSDGQVILYKLSGESVTSDNIKSPMTMKRWIYVGYVRAHTHDVRALTVAVPISREDPLPDEKVKRIRREEKPIDFSYHKWAHLGVPMLISAGDDTKLFAYSVKEFTKFSPHDICPAPQRTPIQLVPNSVFNQLPMLLVQASNCLDILSIRLKNGAFPDVTRRTTGGLTTTDLLARIKSKGSRKIICSSIANSGVFFAYSDHVKPSLFELKRSEVGKSTWSVCKRKLPPLPFAHSMIFTSDSSRLIVAGHDRRIYVVDLESSELVHTFTPCRELCDEGLPPTEPPITRMFTSSDGQWLTAVNCFGDIYVFNLEILRQHWFISRLDGASVTAGGFPPQNNNILIVTTSSNQVYAFDVEAKQLGEWSMRHTFHLPKRYQEFPGEVIGLSFAPSSSSSSVVVYSARAMCLIDFGLPVEQDDGDVPNAQDSMTRTLQNPLKGKPKRRKNFEFFAFRDPVLFSAHLSKGAFLLIDKPWLEVVKGLEAQPVHRHIFGT 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00629 804 Gene3D - 157 432 IPR015943 GO:0005515
Bva10g00629 804 ProSiteProfiles Trp-Asp (WD) repeats profile. 200 241 IPR001680 GO:0005515
Bva10g00629 804 MobiDBLite consensus disorder prediction 123 164 - -
Bva10g00629 804 ProSiteProfiles Trp-Asp (WD) repeats profile. 291 332 IPR001680 GO:0005515
Bva10g00629 804 Pfam WD domain, G-beta repeat 294 322 IPR001680 GO:0005515
Bva10g00629 804 Pfam WD domain, G-beta repeat 207 232 IPR001680 GO:0005515
Bva10g00629 804 Gene3D - 2 138 IPR015943 GO:0005515
Bva10g00629 804 SUPERFAMILY WD40 repeat-like 7 327 IPR036322 GO:0005515
Bva10g00629 804 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 200 232 - -
Bva10g00629 804 SUPERFAMILY WD40 repeat-like 267 705 IPR036322 GO:0005515
Bva10g00629 804 Gene3D - 482 724 IPR015943 GO:0005515
Bva10g00629 804 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 804 IPR044622 GO:0010073|GO:0035266
Bva10g00629 804 SMART WD40_4 243 281 IPR001680 GO:0005515
Bva10g00629 804 SMART WD40_4 49 95 IPR001680 GO:0005515
Bva10g00629 804 SMART WD40_4 284 323 IPR001680 GO:0005515
Bva10g00629 804 SMART WD40_4 193 232 IPR001680 GO:0005515
Bva10g00629 804 SMART WD40_4 98 187 IPR001680 GO:0005515
Bva10g00629 804 SMART WD40_4 3 42 IPR001680 GO:0005515
Bva10g00629 804 SMART WD40_4 535 570 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00629 Bva-Chr10 5517112 5522973 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00629 K14548 - jre:109001109 1216.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00629 10 5517112 5522973 Bva10g00629 10 5517112 5522973 ECH