Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00618 ATGTTCTTCTTTGACGAAGAAGAGGTTCAGTTCCCATTCCCATGTCCGATTACTGCAGATGAAATACAGGAGTTGTTAAGTTTCATTGATCAATCAGGTGACCCGGCCAGCCCAAACTCCGGTTCGCAAGATTCGAACCGGTCGGTTTACTCGATGGACGAGAGAAGGCGCGGGCGCAAGATATCGAACCGGGAGTCAGCGCGACGGTCCCGCTGGAGAAAGAAGCAGCGTTTGGAGAACCTGACAAACAAAGCGAACCAGTTGAAAATGGAAAACCGAGAACTGAAATACCGGTTAGGCATGACCATGCATTGTCATCTCAAAGTATCCGGACAGAATGAGCAGCTAAGATCCGAAGCCATATCCCTTATGACCCGGCTTTCGGATCTATGTCGGATTATAGGCACTGTGCATTCCCAGTA 422 0.4929 MFFFDEEEVQFPFPCPITADEIQELLSFIDQSGDPASPNSGSQDSNRSVYSMDERRRGRKISNRESARRSRWRKKQRLENLTNKANQLKMENRELKYRLGMTMHCHLKVSGQNEQLRSEAISLMTRLSDLCRIIGTVHSQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00618 140 SMART brlzneu 51 115 IPR004827 GO:0003700|GO:0006355
Bva10g00618 140 CDD bZIP_plant_GBF1 56 106 IPR045314 GO:0003700|GO:0006355
Bva10g00618 140 PANTHER BZIP TRANSCRIPTION FACTOR 18 139 - -
Bva10g00618 140 SUPERFAMILY Leucine zipper domain 55 106 IPR046347 GO:0003700|GO:0006355
Bva10g00618 140 MobiDBLite consensus disorder prediction 30 48 - -
Bva10g00618 140 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 53 99 IPR004827 GO:0003700|GO:0006355
Bva10g00618 140 PANTHER BZIP TRANSCRIPTION FACTOR 44 18 139 - -
Bva10g00618 140 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 59 73 IPR004827 GO:0003700|GO:0006355
Bva10g00618 140 Gene3D - 53 104 - -
Bva10g00618 140 Coils Coil 71 98 - -
Bva10g00618 140 MobiDBLite consensus disorder prediction 30 81 - -
Bva10g00618 140 Pfam bZIP transcription factor 55 100 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00618 Bva-Chr10 5465287 5465709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00618 1 139 bZIP Transcription Factor Family AT1G59530 38.732 9.02e-19 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva10g00618 bZIP_1 2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00618 - - ccaj:109788674 147.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00618 10 5465287 5465709 Bva06g02178 06 14288345 14288782 BWGD