Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00617 ATGGAGAAGATCTGCGTCGCCGTTCGACTTCGACCTTCTGTGTCCCAGGAGTCCTTCAACGGTAACTTCTGGAAGATTGAAGAAAATCGCATTTCTCTTCACAAGACTCAGGGCACTCCTATCTCTGGATGTTCTTATGCTTTTGATCATATTTTCGACGAAAGTAGCACAAATGCCAGTGTGTACAAGCTCCTCACTAAGGATATCATTCAAGGCGCCATGGAAGGATTCAACgGAACTGCTTTTGCTTATGGGCAGACCAGCAGTGGCAAGACATTCACCATGAATGGTTCTGAAACAGATCCAGGAGTAATTCCTCGTGCTGTTCAAGAAATATTCGAAAAAACTCAGATGATGTCTGATCGAGAGTTTCTAATTCGAGTTTCCTACATGGAAATCTATAATGAAGAAATCAATGATCTTCTTGTGGTTGAGAACCAGAAATTGCAAATTCATGAGAGTTTGGAGcGTGGAATATTTGTTGCAGGCCTTCGAGAGGAAATTGTCAATAATGCTGAACAAGTGTTGAATCTCCTTGAGGCAGGGGAAGTTAACAGGCACTTTGGTGAGACAAATATGAATGTCAGGAGTAGTAGATCACATACAATATTCAGAATGGTGATTGAAAGCAAGAGGAAGGATTCCAATCCTGCTGGTGATTATTCAACTAGCGATGCTGTCCGAGTTTCAGTCCTGAATTTGGTAGATTTAGCTGGATCCGAAAGGATTGCCAAGACCGGAGCTGGTGGGGTACGTTTAAAAGAAGGCAAATACATCAACAAGAGCTTAATGGTTCTCGGTAATGTCATTAACAAACTAAGCGATGGTTCAAAGCAAAGGGGCCATATTCCCTATCGTGATAGTAAGTTAACTCGTATACTCCAACCGGCTCTTGGTGGTAATGCGAAAACTTCCATTGTTTGCACCGTAGCGCCTGAAGAGGTTCATATTGAGGAAACAAAGGGAACTCTTTACTTTGCTAGTAGAGCCAAACGCATCACTAATTGTGTTCAAGTCAATGAGATTTTGACGGATGCGGCCTTGTTAAAGCGGCAAAAGTTGGAGATAGAGGAGCTGCGTCGAAAACTTGAGGGATCCCATGCTGAGGTACTAGAGCAAGAGATTCTTAAATTAAGGAATGATTTGCTCAAGTATGAACTAGAGCGAGAGAACCTTGAAATGGAATTGGAAGAGGAAAGGAAGTCGCACGAAGAACGTGATCAATGGATTAAGGAACAGcagatgaaaattgaaaatctcaGCAGTCTTGTATCTTTGTCAAACCGTGAGAATAACAACAGTCAGGGGCAAGATTCTCTGAGGCACAACCTTAAGGAAGAATCCAGTGAAAGTAATAGTACATCTCGAGGAGATATATTTAGAACCCCTTGTTTAAAGGCAGCTCCAAAATCTTTTGTTGCCAAGCGATCAGATTATTCAGCACTGCCAGATTTTAGCCCCCTTCCAGATGCTTTTAGTAACGTGGTTGATGAAGATGCGTGGTTGAAAATGAACAAAGGTTATGTAGCAGACCTCGATTCGCTTCAAAGCACTCCAGCTGGGAAAGTTCAATCGTTCCCGACAAGTGACATAACTTCTGGATGTTTAAATGAAATGTACGATGGAGAAATTCAAGATTTGAGGAGACAATTGAAACTTGCtaatgaaaagataaatgaCCTTGAGAGAAAGCATTCAGAGCAAATACTACTGAACCAGCAATTAATGGCAGAGACATCTAAACTTCAGCAAGAAGCACGATCAATTCGAGAAATTCCTCAGAGTTTGTCCGAATCCCTGGTAAACTTCAAAGACAGCTATCAGGAGGTTTTGTCAGCATTGCAGAAATCTGTATCTGATGGCAAACTATCAACTGCAAAAATGCTTTCCACAATGAATGAAGTTGGAGAACAGCTGTTTACAACATTGGAAGCTTATTTTACAATGGACCTTGATGATAAAAGGTCTTTCACTGAGAATAGTGCTTCAGTTCAAcgcaaaatatttattgagagGATGAATAGCATAACTACGTTACTAGGATCATCAGAAGGCCCAATTACTGAGAAGGATCAGGAGGAAAATTCCATGTACAGCAATCGCCATAAGGACTCTGATTTGGGAGGGGAAATAGCTACTTCAAAGGAGGCAATGAGCAGCGAATTCAACTCCATCAAAGAAAGGTACTGTGTCTTAGAGGAAGACTTGAATACCAGTAATCGCCTTCTTGAAGTTATGAAATATAGGTATGATAGCTTGGAAAGGGACTTTCTGCATTTGAAAGACGAGAGGGATTCTCTGCTCCAGATGGTCTCAGAATCATCTCAAAGACTTGCATCGATTTCCAGCGAAAAGGAGAATGCTTTGAAGGATTTAAATATTGAAGTACGCAGAAGGAAAAATTTAGACGGAGAAGTGAAGCGATTCACTGCGACGTTTGCCTGCCGTCAAGGACAACTCGCGTCCTTCCATAATGAATTCAAGGCACAACTTGAGAAACTGAGAGCTCATGGTTCAATCTCAGTACCCAAATCTCTTGGGTGTTA 2546 0.4081 MEKICVAVRLRPSVSQESFNGNFWKIEENRISLHKTQGTPISGCSYAFDHIFDESSTNASVYKLLTKDIIQGAMEGFNGTAFAYGQTSSGKTFTMNGSETDPGVIPRAVQEIFEKTQMMSDREFLIRVSYMEIYNEEINDLLVVENQKLQIHESLERGIFVAGLREEIVNNAEQVLNLLEAGEVNRHFGETNMNVRSSRSHTIFRMVIESKRKDSNPAGDYSTSDAVRVSVLNLVDLAGSERIAKTGAGGVRLKEGKYINKSLMVLGNVINKLSDGSKQRGHIPYRDSKLTRILQPALGGNAKTSIVCTVAPEEVHIEETKGTLYFASRAKRITNCVQVNEILTDAALLKRQKLEIEELRRKLEGSHAEVLEQEILKLRNDLLKYELERENLEMELEEERKSHEERDQWIKEQQMKIENLSSLVSLSNRENNNSQGQDSLRHNLKEESSESNSTSRGDIFRTPCLKAAPKSFVAKRSDYSALPDFSPLPDAFSNVVDEDAWLKMNKGYVADLDSLQSTPAGKVQSFPTSDITSGCLNEMYDGEIQDLRRQLKLANEKINDLERKHSEQILLNQQLMAETSKLQQEARSIREIPQSLSESLVNFKDSYQEVLSALQKSVSDGKLSTAKMLSTMNEVGEQLFTTLEAYFTMDLDDKRSFTENSASVQRKIFIERMNSITTLLGSSEGPITEKDQEENSMYSNRHKDSDLGGEIATSKEAMSSEFNSIKERYCVLEEDLNTSNRLLEVMKYRYDSLERDFLHLKDERDSLLQMVSESSQRLASISSEKENALKDLNIEVRRRKNLDGEVKRFTATFACRQGQLASFHNEFKAQLEKLRAHGSISVPKSLGC 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00617 848 ProSiteProfiles Kinesin motor domain profile. 3 333 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva10g00617 848 Coils Coil 537 592 - -
Bva10g00617 848 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 364 IPR027417 -
Bva10g00617 848 PRINTS Kinesin heavy chain signature 231 249 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva10g00617 848 PRINTS Kinesin heavy chain signature 283 304 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva10g00617 848 PRINTS Kinesin heavy chain signature 76 97 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva10g00617 848 PRINTS Kinesin heavy chain signature 191 208 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva10g00617 848 MobiDBLite consensus disorder prediction 681 709 - -
Bva10g00617 848 MobiDBLite consensus disorder prediction 428 459 - -
Bva10g00617 848 ProSitePatterns Kinesin motor domain signature. 230 241 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bva10g00617 848 MobiDBLite consensus disorder prediction 687 709 - -
Bva10g00617 848 Gene3D Kinesin motor domain 1 365 IPR036961 -
Bva10g00617 848 PANTHER CENTROMERE PROTEIN E 2 834 - -
Bva10g00617 848 Pfam Kinesin motor domain 10 333 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva10g00617 848 SMART kinesin_4 1 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva10g00617 848 CDD KISc_CENP_E 3 333 - -
Bva10g00617 848 Coils Coil 349 407 - -
Bva10g00617 848 PANTHER CENTROMERE PROTEIN E 2 834 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00617 Bva-Chr10 5456570 5463110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00617 2 364 Miscellaneous Gene Families AT5G06670 45.205 2.53e-94 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00617 K11498 - qsu:112012158 1135.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00617 10 5456570 5463110 Bva10g00617 10 5456570 5463110 ECH