Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00606 ATGAAGGACGACGGTGCTGATCGAGATAAAGCCAATCCATGGCCGTCGACGAACGAGAAACCCGAAGATATGAAGCTTTGGGGAGTTTTCCTCTTCGGCTTAATTGGCGCCACCGCCACTACCTTCGCCGTTGGTCAACTGCGGAGGACTGTTGATTTGTTTGCTCAGCTTTCCAGGTCACAATCATCATGGAAAGGAGGGAGTGGGAGTTCTTTCCGAACAACTTTTCAGGGAGAAGCTTGGAAAAGGCACAATAAGCGGCTTCAAGAGGAGTTTGAGGAGGAGATGGAGAGAGTGGAACGCATAAGACGCATGCAAAGTGTGTTTAACAGAGAAAGGAATAAGTACAGAAGAAGCTATCAAAGCTGGGAATATGGCTCTGGTGCATATCATCAACAGTTCCAGAGAGATGATTGGTATTGGAAAGCTGATACATCCTTTAGAGATCATCGGACTAATTATCGAGATACTCCAAGAGAGAGTGGAAGCTATTCATTATCACATCACTACTCAGTTTTGGGTCTGGACAGGTTTCGGACCACGCCATACACAGATGCTGAGATCAAGACGGCATTTAGGAATAAGGCAAAGGAGTATCATCCAGATCAGAATCAGGATGATCGAGTGGCTGCTGAGGCAAAGTTTAAAGAGGTGATGAGTTCATACGAGGctataaaacaagaaagaaagaaccgGAATTTTTA 704 0.4418 MKDDGADRDKANPWPSTNEKPEDMKLWGVFLFGLIGATATTFAVGQLRRTVDLFAQLSRSQSSWKGGSGSSFRTTFQGEAWKRHNKRLQEEFEEEMERVERIRRMQSVFNRERNKYRRSYQSWEYGSGAYHQQFQRDDWYWKADTSFRDHRTNYRDTPRESGSYSLSHHYSVLGLDRFRTTPYTDAEIKTAFRNKAKEYHPDQNQDDRVAAEAKFKEVMSSYEAIKQERKNRNF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00606 234 PRINTS DnaJ domain signature 210 230 IPR001623 -
Bva10g00606 234 PRINTS DnaJ domain signature 192 207 IPR001623 -
Bva10g00606 234 Coils Coil 85 105 - -
Bva10g00606 234 Pfam DnaJ domain 169 233 IPR001623 -
Bva10g00606 234 SUPERFAMILY Chaperone J-domain 166 233 IPR036869 -
Bva10g00606 234 MobiDBLite consensus disorder prediction 1 20 - -
Bva10g00606 234 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 232 - -
Bva10g00606 234 Gene3D DnaJ domain 159 234 IPR036869 -
Bva10g00606 234 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 232 - -
Bva10g00606 234 SMART dnaj_3 167 230 IPR001623 -
Bva10g00606 234 MobiDBLite consensus disorder prediction 1 16 - -
Bva10g00606 234 CDD DnaJ 169 223 IPR001623 -
Bva10g00606 234 ProSiteProfiles dnaJ domain profile. 168 234 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00606 Bva-Chr10 5375554 5379101 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00606 - - qsu:111985238 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00606 10 5375554 5379101 Bva06g02191 06 14381831 14385863 BWGD
Bva10g00606 10 5375554 5379101 Bva10g00606 10 5375554 5379101 ECH