Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00598 ATGAGTCTCCACTGCCACTGCAAGCACAAGCATCCTCAGATTTCCAGAGAAACTATGGAAAACTCACAGAAGGACAATGCTTTCGGCGGTTCAGAGAATGCAAGCACGGGATTTGTTTCTGCTGGAGATGACAACATTATAATAAACCCCAAATTTGATGATGGCCTAAATAATTGGTCTGGAAGAGGCTGCAAGATTGCATTACATGATTCCATGGGAGACGGTAAGATTCTGCCAGCGTCTGGGAAATTCTTTGCATCTGCAACAGAACGGACACAAAGCTGGAATGGAATTCAGCAGGAGATCACTGGAAGAGTGCAACGCAAGCTTGTCTATGAGGTCACTGCTTTAGTTCGGATATACGGGAACAATGTCACTACTGCTGATGTAAGGGCCACTCTGTGGGTCCAAGCACCAGATCTTCGAGAGCAGTATATAGGCATCGCCAATGTGCAGGCCACAGACAAAGATTGGGCTCAGTTGCATGGGAGGTTTCTTCTAAATGGTTCTCCATCAAAAGTGGTAATTTATTTAGAAGGTCCTGCTCCCGGCACTGACATTCTCTTGAGTACTTTGGTTGTAAAGCATGCAGCTAAATCACCTCCTTCAACACCACCAGATACTCAGAATGCTGCTTTTGGGATCAATATAATTGAGAACTTCAATTTGTTTGATGGCACCAAAGGATGGTTTCCTCTTGGGAATTGCACTTTAAATGTTGAAACTGGTTCACCGCATATAATTCCACCAATGGCAAGAGACTCCCTTGGGCTTCATGAACCCCTAAGTGGGCGCTATATCCGTGTCACCAACCGCACACAAAATTGGATGGGTCCTGCTCAAATGATCACTGATAAATTGAAACTCTTTCTTACTTACCAAGTATCAGCTTGGGTTCGGATTGGTTCAGGATCAAGTGGTCCACAGAATGTGAATGTGGCCCTTGGCGTTGACAACCAGTGGGTCAATGGAGGACAAGCAGAGGTTGCTGATGATAGATGGCATGAGATTGGTGGGTCCTTCAGGATCGAGAAGAAGCCATCAAAGGTTATGGTTTATGTCCAAGGTCCTGCTCCAGGTGTAGACCTAATGCTTGCTGGACTTCAGATTTTCCCTGTTGATAGACATGAAAGGTTTAAACATTTGAGGAGGCAGACAGACAAGATCCGTAAGCGTGATGTTATCTTGAAATTCTCTGGATTGGACTCAAGCAGCTATCTGGGAACCTTGGTGAAAGTCAGGCAAACACAGAATGATTTTCCAGTTGGAACATGTGTCAACAGAACAAATATTGACAATGAAGATTTTGTTGACTTCTTTGTGAAACATTTTAATTGGGCTGTGTTTGGGAATGAGTTGAAGTGGTATTGGACAGAGGCACAACAGGGAAACTTCAACTACAAGGATGCTGATGAGATGTTAGCGTTGTGTCAGAAAAACAAGATAGAAACTCGCGGTCATTGTATATTCTGGGAAGTGGATGGAGCTGTTCAGCAATGGGTTAAATCGCTGAATAAGAACGACCTGATGACGGCTGTGCAGAATCGCTTAAATGGCCTTCTGACTCGATACAAAGGCAAGTTCAAGCATTATGATGTTAATAATGAGATGATGCATGGTTCATTTTATCAAGATAGACTTGGAAAAGATATCAGGGCAAACATGTTCAAGACTGCACACCAACTAGATTCTTCTCCAACACTGTTTGTGAATGATTATCATGTTGAAGATGGATGTGACACCAGATCATGTCCAGAAAAATACATACAACATATTCTTGATTTGCAAGAGCAAGGTGCACCAGTTGGAGGGATAGGAATTCAAGGTCATATAGACAGTCCAGTGGGGCCAGTCGTTTCTTCTGCTCTTGACAAATTGGGTATTCTGGGTTTACCAATCTGGTTCACCGAGCTTGATGTTTCTTCCATCAATGAATATGTGAGAGCAGATGATTTAGAAGTTATGATGCGGGAAGCTTTTGCTCACCCTGCAGTAGAGGGTATTATGCTGTGGGGATTCTGGGAATTGTTCATGAGCAGGGATAATTCACACTTGGTGAATGCAGAAGGTGATATCAACGAAGCTGGGAAAAGATACCTTGCCGTCAGAGAAGAGTGGCTGACACGCAGCCATGGTCATGTTGATGAGCAAGGACAGTACAACTTCAGAGGCTTCCATGGAACATACAACGTGGAAGTTGTCACCTTATCCAAAAAGAAGATTTCTAAGACATTTGTTGTTGACGAGGGTGATTCGCCACTGGTGGTATCCATCAACTTATA 2282 0.436 MSLHCHCKHKHPQISRETMENSQKDNAFGGSENASTGFVSAGDDNIIINPKFDDGLNNWSGRGCKIALHDSMGDGKILPASGKFFASATERTQSWNGIQQEITGRVQRKLVYEVTALVRIYGNNVTTADVRATLWVQAPDLREQYIGIANVQATDKDWAQLHGRFLLNGSPSKVVIYLEGPAPGTDILLSTLVVKHAAKSPPSTPPDTQNAAFGINIIENFNLFDGTKGWFPLGNCTLNVETGSPHIIPPMARDSLGLHEPLSGRYIRVTNRTQNWMGPAQMITDKLKLFLTYQVSAWVRIGSGSSGPQNVNVALGVDNQWVNGGQAEVADDRWHEIGGSFRIEKKPSKVMVYVQGPAPGVDLMLAGLQIFPVDRHERFKHLRRQTDKIRKRDVILKFSGLDSSSYLGTLVKVRQTQNDFPVGTCVNRTNIDNEDFVDFFVKHFNWAVFGNELKWYWTEAQQGNFNYKDADEMLALCQKNKIETRGHCIFWEVDGAVQQWVKSLNKNDLMTAVQNRLNGLLTRYKGKFKHYDVNNEMMHGSFYQDRLGKDIRANMFKTAHQLDSSPTLFVNDYHVEDGCDTRSCPEKYIQHILDLQEQGAPVGGIGIQGHIDSPVGPVVSSALDKLGILGLPIWFTELDVSSINEYVRADDLEVMMREAFAHPAVEGIMLWGFWELFMSRDNSHLVNAEGDINEAGKRYLAVREEWLTRSHGHVDEQGQYNFRGFHGTYNVEVVTLSKKKISKTFVVDEGDSPLVVSINL 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00598 760 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 404 702 IPR001000 GO:0004553|GO:0005975
Bva10g00598 760 PANTHER GLYCOSYL HYDROLASE 28 760 IPR044846 GO:0004553|GO:0005975
Bva10g00598 760 SUPERFAMILY Galactose-binding domain-like 43 197 IPR008979 -
Bva10g00598 760 SUPERFAMILY Galactose-binding domain-like 214 375 IPR008979 -
Bva10g00598 760 MobiDBLite consensus disorder prediction 10 32 - -
Bva10g00598 760 SUPERFAMILY (Trans)glycosidases 410 709 IPR017853 -
Bva10g00598 760 Pfam Glycosyl hydrolase family 10 416 673 IPR001000 GO:0004553|GO:0005975
Bva10g00598 760 Pfam Carbohydrate binding domain 216 359 IPR003305 GO:0016798
Bva10g00598 760 Pfam Carbohydrate binding domain 44 183 IPR003305 GO:0016798
Bva10g00598 760 Gene3D - 210 371 - -
Bva10g00598 760 Gene3D - 39 197 - -
Bva10g00598 760 SMART glyco_10 453 689 IPR001000 GO:0004553|GO:0005975
Bva10g00598 760 Gene3D Glycosidases 407 713 - -
Bva10g00598 760 PANTHER - 28 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00598 Bva-Chr10 5312009 5316337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00598 39 760 Glycoside Hydrolase AT1G58370 74.689 0.0 1160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00598 - - gmx:100784250 1308.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00598 10 5312009 5316337 Bva06g02203 06 14450341 14457170 BWGD
Bva10g00598 10 5312009 5316337 Bva10g00598 10 5312009 5316337 ECH