LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva10g00595	ATGGATTTCATGAAGGTTATCGATCAAACAGTTCGAGAAATaaagagagaggtGAATCTGAAGGTACTCAAGGTTCCCGAAACCGAACAGAAGGTTTTGGATGCTACTGACAATGAACCTTGGGGTCCTCATGGTTCTGCACTGGCAGAGATTGCGCAGGCTaccaaaaaattTACTGAATGTCAAATGGTCATGAATGTTCTTTGGACAAGACTGAGCGAGACTGGAAAAGATTGGCGCTATGTATACAAGGCATTAGCTGTTATAGAATATTTGATAGCGAATGGATCTGAACGTGCAGTTGATGACATTATAGAACATACTTTTCAGATCTCCGCACTTTCTAGTTTTGAATATGTGGAGCCCAATGGGAAGGATGTGGGAATCAATGTTAGAAAGAAGGCAGAAACCATTGTGGCTCTTTTGAATAACAAGGATAAGATACAAGAAGTCAGAAATAAAGCTGCTTCAAACCGCGACAAGTACGTTGGACTTTCTTCTACTGGGATTACATATAAGTCTGGGTCAGCCTCATTTAGTAGTGGTAGCTACCAAAGCAGTGATAGACATGGAGGCTTTGGTTCAAGAGATGGTGACAGGTTCAGGGATAGTTATAGAGACAAGGATCACTATGAAGATGAGAAAGTTGAGAAAGATTACTCTGAAAAATCACGTTATGGGTTTACAAGCGACAACCCAGTGAGCTCTTATAAGAAGGGTTCTGCACACTCTGTCAGCAAAAACCAGGATGCCATGTCATCCAGAGTATCAAAGTCATCAAATGACCATGATAACTATAGTTCAATTCCATCTCAAAGTTCAACTGTACCTTCGAACAGCAATGAGGATggttttgatgattttgatcCTAGGGGAACTTCTACTACAAAGGCTCCAGCTGGAAGCTCTAACCAGGTTGATCTCTTTGGAGGAGATCTACTTGGTGACCTCATGGATGCTCCAACTTCTGCTCCAACCGAAAAGCCTGCCATAAGTAGTGTTACAGAGGTTGATCTCTTTGCAGATGCAGCATTTGTATCAGCTGAGCCTCATATAGAGAAAGGAGCTAGTTCTCAACAGCAGGCTCAAAATGAGGTTGATCTATTTGCTTCCCAACCagcaaattcttcttcagttACATCAACAGTTGACTTGTTTTCAATTCCTGAAGCAGTTGTGCAACCAGAGAGCAAGTCAGAAAGCTCTGTTCCTCCAAACAATGACATTGTCGATCCTTTCGCAGCTGTTCCACTCAATAAATTTGAACCTGTTGTGCAACCAGAGAGCAAGTCTGAAAACTCTGGTCCTCCAAACAGTAACATTGCCGATCCTTTCGCAGCTGTTCcacttaataaatttgatggaTCTGATCTTTTTGGCAATTTTACTTCTAATTCTGATTCAGTATCTTCACAGCCCTCAGAAAGCCCTGTCAGTGATGgcaatgaaaatgatataaatggTAAATTCTTAGCAGAGTCTAAAAGTACACTGAGGAAAGATCCTTTCCAGGTCAAGTCTGGTATTTGGGCAGATTCGCTAAGCCGTGGATTAATTGACCTGAATATATCTGCTTCGAAGAAGGTATCCCTGGCAGATGTTGGGATTGTGGGAGGATTGAGCGATGGAtcaaatgaaaaggagaaaggCCCTACACCAGCATTTTACATGGGGAGAGCCATGGGACCCGGCTCCGGCCTTGGTAAGTCTGGATTCACTCCTTCACAGACCGCGGTCGGAGACGACATATTTTCAAACCTAAGCGCCCAGCAATATCAATTCGGTGGGTTCCAAAAGTA	1799	0.4058	MDFMKVIDQTVREIKREVNLKVLKVPETEQKVLDATDNEPWGPHGSALAEIAQATKKFTECQMVMNVLWTRLSETGKDWRYVYKALAVIEYLIANGSERAVDDIIEHTFQISALSSFEYVEPNGKDVGINVRKKAETIVALLNNKDKIQEVRNKAASNRDKYVGLSSTGITYKSGSASFSSGSYQSSDRHGGFGSRDGDRFRDSYRDKDHYEDEKVEKDYSEKSRYGFTSDNPVSSYKKGSAHSVSKNQDAMSSRVSKSSNDHDNYSSIPSQSSTVPSNSNEDGFDDFDPRGTSTTKAPAGSSNQVDLFGGDLLGDLMDAPTSAPTEKPAISSVTEVDLFADAAFVSAEPHIEKGASSQQQAQNEVDLFASQPANSSSVTSTVDLFSIPEAVVQPESKSESSVPPNNDIVDPFAAVPLNKFEPVVQPESKSENSGPPNSNIADPFAAVPLNKFDGSDLFGNFTSNSDSVSSQPSESPVSDGNENDINGKFLAESKSTLRKDPFQVKSGIWADSLSRGLIDLNISASKKVSLADVGIVGGLSDGSNEKEKGPTPAFYMGRAMGPGSGLGKSGFTPSQTAVGDDIFSNLSAQQYQFGGFQK	599

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva10g00595	599	MobiDBLite	consensus disorder prediction	226	282	-	-
	Bva10g00595	599	Pfam	ENTH domain	27	147	IPR013809	-
	Bva10g00595	599	PANTHER	EPSIN/ENT-RELATED	424	590	-	-
	Bva10g00595	599	ProSiteProfiles	ENTH domain profile.	20	152	IPR013809	-
	Bva10g00595	599	MobiDBLite	consensus disorder prediction	463	487	-	-
	Bva10g00595	599	SMART	enth_2	26	152	IPR013809	-
	Bva10g00595	599	PANTHER	CLATHRIN INTERACTOR EPSIN 1	1	425	IPR033521	GO:0006623\|GO:0030276
	Bva10g00595	599	MobiDBLite	consensus disorder prediction	426	440	-	-
	Bva10g00595	599	MobiDBLite	consensus disorder prediction	424	445	-	-
	Bva10g00595	599	PANTHER	CLATHRIN INTERACTOR EPSIN 1	424	590	IPR033521	GO:0006623\|GO:0030276
	Bva10g00595	599	MobiDBLite	consensus disorder prediction	177	330	-	-
	Bva10g00595	599	MobiDBLite	consensus disorder prediction	463	483	-	-
	Bva10g00595	599	PANTHER	EPSIN/ENT-RELATED	1	425	-	-
	Bva10g00595	599	SUPERFAMILY	ENTH/VHS domain	8	152	IPR008942	-
	Bva10g00595	599	CDD	ENTH	28	144	-	-
	Bva10g00595	599	Gene3D	-	24	164	IPR008942	-
	Bva10g00595	599	MobiDBLite	consensus disorder prediction	192	225	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva10g00595	Bva-Chr10	5291822	5296319	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva10g00595	K12471		-	gmx:100809198	773.852

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva10g00595	10	5291822	5296319	Bva10g00595	10	5291822	5296319	ECH