Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00594 ATGGCTTCCCCTCCTCCATCGTATCAGACGGATGTTCCTGTACCAGATTCAGAGCTAGGTGATAAGCCGCTGGATCATGAAGCTCGTTCAACTTCTGTTCCTATTCATATTGTCACAAATGCATCTGAACTTCCCGTTGAATTCCTGGAGCCGTCACCTGAGCAGCAGCTGGTCATAGGATTTGATTGTGAGGGTGTTGACTTGTGTCGCAATGGGACTCTCTGTATAATGCAGCTTGCATTTCCAGATGCTATATACCTGGTTGATGCAATTCAAGGAGGAGAGGAACTTGTTAAAGCCTGTAAGCCTGCACTTGAGTCTAGTTACATCACAAAAGTGATTCATGATTGCAAACGAGATAGTGAGGCATTGTATTTTCAGTTTGGCATCAAGTTGAACAACGTGATGGATACCCAGATTGCTTTTTCACTGATAGAGGAGCAAGAAGGACGGAAAAGATTGCCAGATGAttacatttcttttgtcaGCCTCCTTGCAGATCCACGTTATTGTGGCATATCTTATCTTGAGAAGGAAGAAGTGCGCGTCCTCCTTCGGCAGGACCCAAAGTTTTGGACATACCGACCATTATCTGAACAAATGATCCGTGCAGCCGCTGATGATGTTCGCTTTCTCCTCTacatttatcataaaatgatGGAGAAACTGAATGAAAGGTCTTTATGGTATCTCGGAGTTCGCGGTGCCCTGTATTGCCGATGTTTTTGTATCAACGATAATGCTTATGCTGATTGGCCATCTCTACCGCCTATTCCAGATAATCTAAAAGTTGATGGAAGTACCCCTGAGGAAGAAATCCTTTCAGTTCTTGATGTTCCCGAAGGAAAGATGGGACGTGTAATTGGGAGAAGAGGGGCTTCAATTTTGTCTATTAAGGAGTCTTGCAACGCGGAAATTCTCATTGGAGGTGCTAAGGGCCCACCTGACAAGgttTTCATTATGGGACCGGTGAAGCAAGTGAGGAAAGCAGAGGCAATGCTGAGGGGTAGAATGTTGGAAATGGACAGTAGTGTCAGGCGTCCTCTTGATACTGGGACAGTAGTGTCAGGCGTCCTCTTGATACTGAACGTGAGGACTCGTGCAAATGCAATCATACATTTAAGTGCTCTTCTCATTTA 1139 0.4399 MASPPPSYQTDVPVPDSELGDKPLDHEARSTSVPIHIVTNASELPVEFLEPSPEQQLVIGFDCEGVDLCRNGTLCIMQLAFPDAIYLVDAIQGGEELVKACKPALESSYITKVIHDCKRDSEALYFQFGIKLNNVMDTQIAFSLIEEQEGRKRLPDDYISFVSLLADPRYCGISYLEKEEVRVLLRQDPKFWTYRPLSEQMIRAAADDVRFLLYIYHKMMEKLNERSLWYLGVRGALYCRCFCINDNAYADWPSLPPIPDNLKVDGSTPEEEILSVLDVPEGKMGRVIGRRGASILSIKESCNAEILIGGAKGPPDKVFIMGPVKQVRKAEAMLRGRMLEM 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00594 341 Gene3D K Homology domain, type 1 262 339 IPR036612 GO:0003723
Bva10g00594 341 ProSiteProfiles Type-1 KH domain profile. 272 334 - -
Bva10g00594 341 CDD Egl_like_exo 48 243 - -
Bva10g00594 341 Pfam KH domain 277 335 IPR004088 GO:0003723
Bva10g00594 341 Gene3D - 4 234 IPR036397 GO:0003676
Bva10g00594 341 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 268 339 IPR036612 GO:0003723
Bva10g00594 341 CDD KH-I 277 334 - -
Bva10g00594 341 SMART kh_6 271 339 IPR004087 GO:0003676
Bva10g00594 341 PANTHER - 7 339 - -
Bva10g00594 341 SUPERFAMILY Ribonuclease H-like 5 248 IPR012337 -
Bva10g00594 341 MobiDBLite consensus disorder prediction 1 26 - -
Bva10g00594 341 Pfam 3'-5' exonuclease 53 223 IPR002562 GO:0003676|GO:0006139|GO:0008408
Bva10g00594 341 SMART 35exoneu6 35 224 IPR002562 GO:0003676|GO:0006139|GO:0008408
Bva10g00594 341 PANTHER EGALITARIAN, ISOFORM B 7 339 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00594 K18740 - qsu:112003874 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00594 10 5286603 5291579 Bva10g00594 10 5286603 5291579 ECH