Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00589 ATGCAATCGAGTGTTGCACCTCTAGAAGATGGAAGGGTTAATGCGGTTTTGAGCAGATCGAACCAATCGAAAGCCTTGCCTCTAAGAGCACTGCAGATACTTGTGTTGTTTTTCGTTCTATGTATTGTTTTTTCGGTTATCAGTGTTTACACGGTTAAGCATTTTGGGATTCAGAATGTAGTGACATCCGTGAAGGACGGTTTTCAGCCATGTTATGGGAAGGAGCCAGGTACTTTGGAGAGCTGGATTAAACCTCCATCAAATCTGATGCACAACTTGACtgataaagaattattttggaGGGCCTCTTTTGTGCCTCGAATAAAGAAGTATCCTTTTCGAAGAGTTCCAAAGATTGCATTCATGTTCTTGACCAAAGGACCATTGCCACTTGCACCCCTCTGGGAGAGGTTTCTCAAGGGTCATGAGGGGTTTTATTCCATCTATATTCATTCACTGCCATCGTTTCAAGCTAAATTTCCATCATCGTCTGTGTTTCACAACAAACAAATCCCTAGCCAGATTTCTGAATGGGGAAAGATGAGCATGTGTGATGCTGAAAGAAGGCTACTTGCTAATGCATTACTTGATATCTCCAATGAGCGCTTCATGGGTGCATTTGATGATCCTGGGCCCTATGGGAGAGGACGTTATAACGAGAACATGGCCCCACTCGTTGATATTACACGGTGGCGTAAAGGGTCTCAATGGTTTGAAATAAATCGGAAGCTTGCCATCAATATTATAGAAGACACTACattttatccaaaatttgAACAGTTCTGTAAGCCAGCTTGTTATGTGGACGAGCACTATTTCCCCACCATGCTGACCATTCAAGCAGGAAATCTCTTGGCAAATAGAAGCATCACTTGGGTGGACTGGTCCAGGGGTGGGGCTCACCCAGCTACCTTCGGAAGGACAGATATCACGGAGGAGTTTTTTCAAAGAGCTCGTGGAGGTCACCAATGCCTTTATAATAATCGAAATACTTCTGTTTGTTTTCTGTTTGCTAGAAAAATCGCTCCTAGTGCTATGGAACCTCTGTTACGTATAGCACCGAAGGTTTTGGGCttctg 1079 0.4254 MQSSVAPLEDGRVNAVLSRSNQSKALPLRALQILVLFFVLCIVFSVISVYTVKHFGIQNVVTSVKDGFQPCYGKEPGTLESWIKPPSNLMHNLTDKELFWRASFVPRIKKYPFRRVPKIAFMFLTKGPLPLAPLWERFLKGHEGFYSIYIHSLPSFQAKFPSSSVFHNKQIPSQISEWGKMSMCDAERRLLANALLDISNERFMGAFDDPGPYGRGRYNENMAPLVDITRWRKGSQWFEINRKLAINIIEDTTFYPKFEQFCKPACYVDEHYFPTMLTIQAGNLLANRSITWVDWSRGGAHPATFGRTDITEEFFQRARGGHQCLYNNRNTSVCFLFARKIAPSAMEPLLRIAPKVLGF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00589 359 Pfam Core-2/I-Branching enzyme 203 317 IPR003406 GO:0016020|GO:0016757
Bva10g00589 359 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 4 203 IPR044174 GO:0016757
Bva10g00589 359 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 202 358 IPR044174 GO:0016757
Bva10g00589 359 PANTHER - 4 203 - -
Bva10g00589 359 PANTHER - 202 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00589 Bva-Chr10 5262986 5266728 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00589 - - qsu:111999104 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00589 10 5262986 5266728 Bva10g00589 10 5262986 5266728 ECH