Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01172 ATGGCCCAACCAGTCTCAAATGAGTATGAAATTCCAGAAACAGAAACACCAATCCCTTCTTTGGATGATTTGATAGAGCAAAATTTGGGAAATTTTGGGTGGATACAGTTCATGCAATCGGTCCTTGTCTCTTTGTCCATGTTCTTTGATGCACAACAAACATTCATTACCATCTACACTGATTCCCACCCATCATGGCACTGCACAGATCACACCAAGTGCAGCTCAGACTCTGATATCTGCATGCTTCCAAGATCAGCTTGGTCATGGAATGGACCATCTTCAATGACAATCATATCCCAATGGGATATTCAGTGTGCTAGTTCCTTCATCATAGGTTTACCtcaatcttctttcttctttggctGCTTGTTTGGAGGATTCCTTCTGGCAACCATGGCCGATTCCTCCCTAGGCCGCAAGAACTTGCTCTTCCTTTCTTGCTTCACAATGTCTGCAACTTCTATCGTCATTATAGTCTCCACGAATGTTTGGATTTACTCAGCATTGAGATTCCTAAGTGGGTTTTGCCGTTCATCGATTATAACGTGTGCTTTGGTGTTAGTGGCAGAGAAAGGGAACAAAAAATGGAGATTCCGAATGGGACTTGTTGCACTTCTCAGCTTCTCATTGGGGTTTCTGTCCTTGCCTGCTATAGCTTATGCCAATAGAGGTTCCTCTTGGAGGTTTATTTACCTTTGGACTTCAATTCCTGCCATTTCCTATTCTGTCTctgcttatttttttgttactgAATCTCCAAGATGGCTTCTCATGAAAAGTGAACAAGAAGAAACCTCAGCAATACCGCGAAGTGCTCAAACAGAAGCTGATGGAGACACAATTTTGAGCCAGTTTAAAATGCTTCCAAAGCCAAAGGCTTCACTTATCAATCTCTTCTCATCAATAAAGGCCTTGTTTGGGAAAAGATGGGTAACTCAAAGATTATTAGCAGTTATGGCTGTGGGTTTTGGCATTGGAATGGTGTACTTCGGCATGCCATTAAGTGTAGGAAACTTGGGCTTTAACATCTACTTGGTTGTTATGTTCAATGCATCATTGGAAATACCCAGTTACATTGccactttatttttggaaaactGCAGAAGAAAAGTTTCCATTCTTGCATTTTCAGTGGTTAGTGGGATTTGCAGTATACTGTGTAGTGTAATAGGAAAAAGGGTTAAAGGAGTGACAATAGGACTAGAGCTAGCATCATTCTTTGGTGTGTGCGTAGCCTTTAATGTGCTGCTCATATACATAACCGAGCTCTTTCCCACATGTGTGAGGAACACTGCAACTTCAATGGTGAGGCAGGCAATTATATCTGGTGCTATGTGCAGTCCATTTTTGATATCGGCAGGGAGGAAAAATGACATTTTGTCTTATGGTGTGTTTGGAGTGGTTATAATGGGATGTAGCTTTTCTGTGGCGTTTTTGCCAGAGACAAAGGGAATAACTCTGTGTGATACCATGGATGAACAAGTACAGAAGGAAAGTATTACTCTGTA 1511 0.4011 MAQPVSNEYEIPETETPIPSLDDLIEQNLGNFGWIQFMQSVLVSLSMFFDAQQTFITIYTDSHPSWHCTDHTKCSSDSDICMLPRSAWSWNGPSSMTIISQWDIQCASSFIIGLPQSSFFFGCLFGGFLLATMADSSLGRKNLLFLSCFTMSATSIVIIVSTNVWIYSALRFLSGFCRSSIITCALVLVAEKGNKKWRFRMGLVALLSFSLGFLSLPAIAYANRGSSWRFIYLWTSIPAISYSVSAYFFVTESPRWLLMKSEQEETSAIPRSAQTEADGDTILSQFKMLPKPKASLINLFSSIKALFGKRWVTQRLLAVMAVGFGIGMVYFGMPLSVGNLGFNIYLVVMFNASLEIPSYIATLFLENCRRKVSILAFSVVSGICSILCSVIGKRVKGVTIGLELASFFGVCVAFNVLLIYITELFPTCVRNTATSMVRQAIISGAMCSPFLISAGRKNDILSYGVFGVVIMGCSFSVAFLPETKGITLCDTMDEQVQKESITL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01172 503 Pfam Sugar (and other) transporter 103 488 IPR005828 GO:0016021|GO:0022857|GO:0055085
Bva09g01172 503 SUPERFAMILY MFS general substrate transporter 95 488 IPR036259 -
Bva09g01172 503 Gene3D MFS general substrate transporter like domains 33 498 IPR036259 -
Bva09g01172 503 ProSiteProfiles Major facilitator superfamily (MFS) profile. 39 484 IPR020846 GO:0022857
Bva09g01172 503 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 13 500 - -
Bva09g01172 503 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 13 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01172 Bva-Chr9 6264890 6266401 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01172 1 499 Organic Solute Cotransporters AT1G79360 47.969 2.55e-174 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01172 - - lja:Lj3g3v0462100.1 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01172 09 6264890 6266401 Bva09g01172 09 6264890 6266401 ECH