Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02206 ATGGGAAGAGCTCCTTGCTGTGacaaagcaaatgtcaagagAGGGCCATGGTCTCCCGAAGAAGACGTAACTCTCAAGAGCTATGTAGAGACTCATGGCACTGGTGGAAATTGGATTGCATTGCCCAAAAAAGCTgGCCTTAGGCGTTGTGGCAAGAGTTGCCGTCTACGGTGGCTCAATTATCTCAGGCCAGACATCAAACATGGAGGCTTCACCGAAGAGGAGGACAGAATCATTTGCACCCTCTACGGTCAGATGGGAAGCAGGTGGTCCGCTATAGCTTCTCAGCTTTCTGGAAGAACAGACAACGATGTAAAGAACTACTGGAATACTAAACTAAAGAAGAAGTTAATGGCAGGAAAAGTGAGCCTCAAAACAACGATTGACACTGTGACTGCTGCTTCAACCCCACTACTAACCCAAATTGCTGAAACACAAAATCAGAGCTGTTCACCCTCGTCTCTGCCAATCCTAAGCGATGCTAATTCTGGGTTTAACATTAACCCTCAAAACATCAGTTTTGGCTCAGTTCAATTATTTAGTCAGGGGTTTGTGGATGTTCCAGAAATAGGTGCAAATTCAAAGAACAATCACATGTTGTCACTGTCTCGAGAAGGGTCAGGCATTTCAGATTCTTCGCCAATTGCAATGGAAAGCAAGTGTATAACGCTGCCTGAACACGGCAGTGATGAAACTTCCGAAGCGTTGATGGATTTTGGCTTTGGATTCCATTGTGACTTCGTCAATGGTCTTTACTATCAAGAGAAAGTTGGAGAATTAGCTCCGGGTTGCTATCCTGATCCGTTGGTTGATTTTACCTATGCTGACATTAAGCCACAAGGACTGAATCAAAACGTTGTTTA 863 0.4368 MGRAPCCDKANVKRGPWSPEEDVTLKSYVETHGTGGNWIALPKKAGLRRCGKSCRLRWLNYLRPDIKHGGFTEEEDRIICTLYGQMGSRWSAIASQLSGRTDNDVKNYWNTKLKKKLMAGKVSLKTTIDTVTAASTPLLTQIAETQNQSCSPSSLPILSDANSGFNINPQNISFGSVQLFSQGFVDVPEIGANSKNNHMLSLSREGSGISDSSPIAMESKCITLPEHGSDETSEALMDFGFGFHCDFVNGLYYQEKVGELAPGCYPDPLVDFTYADIKPQGLNQNVV 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02206 287 CDD SANT 71 113 IPR001005 -
Bva06g02206 287 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bva06g02206 287 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Bva06g02206 287 SMART sant 13 64 IPR001005 -
Bva06g02206 287 SMART sant 67 115 IPR001005 -
Bva06g02206 287 PANTHER OS09G0431300 PROTEIN 1 170 - -
Bva06g02206 287 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Bva06g02206 287 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Bva06g02206 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Bva06g02206 287 CDD SANT 16 62 IPR001005 -
Bva06g02206 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bva06g02206 287 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Bva06g02206 287 Gene3D - 7 68 - -
Bva06g02206 287 PANTHER OS09G0431300 PROTEIN 1 170 - -
Bva06g02206 287 Gene3D - 69 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02206 Bva-Chr6 14470734 14472449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02206 1 135 MYB Transcription Factor Family AT5G57620 73.333 1.93e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva06g02206 Myb_DNA-binding 1.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02206 K09422 - gmx:100817747 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02206 06 14470734 14472449 Bva06g02206 06 14470734 14472449 ECH
Bva10g00596 10 5301460 5303175 Bva06g02206 06 14470734 14472449 ECH