Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02186 atgaagccCATGAATGATGATAACAACGATGGGAATAATCATAACTGGTTGGGGGTCTCTCTTTCACCCCACATGAAATTAGAGGTGACTTCTTCTGTCTCTCAACATCATCAGTACCATCATCAACCCCAACcttctgctgctgctgtttCAAGTGGGGTTCCTGTTCATGTTCCAACAACTTTCTATTTGTCCCCTTCGAACTTAAGCACCTCCGGAATCTGTTATGGTGCTGGGGATAATGGTGCTTTCCATTCTCCCTTAACTGTAATGCCACTCAAGTCTGATGGCTCGCTTTGCATAATGGAAGCTCTCACTAGGTCACAAACGCAGGTTATGGTGCCGAACTCCTCGCCCAAACTGGAGGACTTTCTAGGTGGTGCAACTATGGGAAGCCACGAGTATGGTGGGCATGAAAGGGAGACTATGGCTCTGAGCTTGGACAGTATATACTACAGCCAAAATGCAGAGTCTCAAACTAGCAGAGACCATTCTATGGAACTTATTTCATACCCTTTCAGGCAACAAGCTGGGCATATCACCGTCCAACCACACCTGTATTATTCTGGGCTTGCCTGCCATGGCATGTATCAAACACCTTTGCAGGAAGATGCCAAAGGTACCCACGTTACTGCCTGCGATTCTCAAATTTCTCAGATGGCGGAGGAAGGCATGAAAAACTGGGTGAACCACCAGGCTCTGGAGCAGCAAATGAATGATAATCTGGGTGATGATCGTGGAGCTTCTGGTTCTGCTACAGTTGGCTGTGGGGACTTGCAGTCTTTGAGCTTATCTATGAGTCCTGGTTCGCAGTCTAGTTGTGTAACACCTCCACGGCAGATTTCACCTTCTGGGACTGATTCAGTGACTGCTCTAGAAGGCAAGAAGAGAGCAGCTAGCAAGTCGAGCCAGAAGCAACCTGTGCATAGGAAATCCATTGACACATTTGGCCAGAGAACGTCGCAATATAGGGGAGTCACAAGGCATAGGTGGACTGGTAGATATGAAGCTCATTTGTGGGATAATAGTTGCAAGAAGGAAGGACAGACTAGGAAAGGAAGACAAGTTTATTTGGgGGGATATGATATGGAAGAGAAAGCTGCTAGAGCTTATGATCTCGCTGCTCTTAAGTATTGGGGTCCTTCAACCCACATAAACTTTCCGTTGGAAAATTACCAGGCAGAACTTGAAGAGATGAAGAACATGAGCAGGCAAGAATATGTTGCCCACTTGAGAAGAAAAAGTAGTGGGTTCTCTAGAGGTGCTTCAATGTACAGGGGAGTGACAAGGCACCACCAGCATGGGAGATGGCAAGCAAGGATAGGAAGAGTTGCAGGAAACAAGGACCTTTATCTTGGGACATTCAgcACCCAAGAGGAAGCAGCTGAAGCATATGACATAGCTGCAATCAAATTCCGTGGGGTTAATGCAGTCACCAACTTTGATATTTCTAGATATGATGTTGAAAGAATCATCGCCAGCAATACTCTACTAGCTGGGGAGCTGGCCAGGCGAAACAAAGATAATGAACCAAGAAATGAGACTTATGAGTATGATGCATCAAGCGTTGGCAATGGGGAAAGAGTTCAAGGTGAAAACAACAATGGAAATGGTTCTGATTGGAAGATGATTTTGTATCCACAGCAAGAGTCAAATAGCTGTGAGCAGAAAAACATGAACAGCGGAAATTATAGAAATTCCGCTCTCTCTATGGCCCTACAAGATCTCATTGGGATTGATTCAGTAGGTTCTGGCCAGCCCATGCTAGATGACTCTGCCAAAATAGGGACTCATTTTTCAAACCCGTCCTCGCTGGTGACCAGTTTAAGCAGTTCAAGAGAGGCCAGCCCTGATAAGAATGGCCCCGCGTTGCTCTTCCCAAAGCCTCCAATGGCATCAAAGATTGTTAGCCCCATTGCTAGTGCTGCTGCTGTTACTTCTTGGTTTCCTTCCTCCGCAGCAGCAACTCAATTGAGGCCAGCTTCAGCTATTCCCATATCTCACTTGCCAGTTTTTGCAGCTTGGAATGACACCTA 2036 0.4553 MKPMNDDNNDGNNHNWLGVSLSPHMKLEVTSSVSQHHQYHHQPQPSAAAVSSGVPVHVPTTFYLSPSNLSTSGICYGAGDNGAFHSPLTVMPLKSDGSLCIMEALTRSQTQVMVPNSSPKLEDFLGGATMGSHEYGGHERETMALSLDSIYYSQNAESQTSRDHSMELISYPFRQQAGHITVQPHLYYSGLACHGMYQTPLQEDAKGTHVTACDSQISQMAEEGMKNWVNHQALEQQMNDNLGDDRGASGSATVGCGDLQSLSLSMSPGSQSSCVTPPRQISPSGTDSVTALEGKKRAASKSSQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQAELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDISRYDVERIIASNTLLAGELARRNKDNEPRNETYEYDASSVGNGERVQGENNNGNGSDWKMILYPQQESNSCEQKNMNSGNYRNSALSMALQDLIGIDSVGSGQPMLDDSAKIGTHFSNPSSLVTSLSSSREASPDKNGPALLFPKPPMASKIVSPIASAAAVTSWFPSSAAATQLRPASAIPISHLPVFAAWNDT 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02186 678 MobiDBLite consensus disorder prediction 262 318 - -
Bva06g02186 678 ProSiteProfiles AP2/ERF domain profile. 424 482 IPR001471 GO:0003700|GO:0006355
Bva06g02186 678 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12 676 - -
Bva06g02186 678 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 12 676 - -
Bva06g02186 678 MobiDBLite consensus disorder prediction 30 52 - -
Bva06g02186 678 SMART rav1_2 322 394 IPR001471 GO:0003700|GO:0006355
Bva06g02186 678 SMART rav1_2 424 488 IPR001471 GO:0003700|GO:0006355
Bva06g02186 678 Gene3D AP2/ERF domain 424 484 IPR036955 GO:0003700|GO:0006355
Bva06g02186 678 Gene3D AP2/ERF domain 321 390 IPR036955 GO:0003700|GO:0006355
Bva06g02186 678 Pfam AP2 domain 425 474 IPR001471 GO:0003700|GO:0006355
Bva06g02186 678 Pfam AP2 domain 322 380 IPR001471 GO:0003700|GO:0006355
Bva06g02186 678 Coils Coil 389 409 - -
Bva06g02186 678 CDD AP2 423 484 IPR001471 GO:0003700|GO:0006355
Bva06g02186 678 CDD AP2 321 388 IPR001471 GO:0003700|GO:0006355
Bva06g02186 678 ProSiteProfiles AP2/ERF domain profile. 322 388 IPR001471 GO:0003700|GO:0006355
Bva06g02186 678 SUPERFAMILY DNA-binding domain 423 484 IPR016177 GO:0003677
Bva06g02186 678 MobiDBLite consensus disorder prediction 30 49 - -
Bva06g02186 678 MobiDBLite consensus disorder prediction 262 289 - -
Bva06g02186 678 PRINTS Ethylene responsive element binding protein signature 323 334 IPR001471 GO:0003700|GO:0006355
Bva06g02186 678 PRINTS Ethylene responsive element binding protein signature 464 484 IPR001471 GO:0003700|GO:0006355
Bva06g02186 678 SUPERFAMILY DNA-binding domain 321 390 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02186 Bva-Chr6 14346932 14350983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02186 5 508 AP2-EREBP Transcription Factor Family AT4G37750 53.383 1.62e-168 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Bva06g02186 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02186 K09285 - zju:107420624 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00612 10 5417673 5421980 Bva06g02186 06 14346932 14350983 BWGD
Bva06g02186 06 14346932 14350983 Bva06g02186 06 14346932 14350983 ECH