Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02189 ATGGCTCTGGAAGCTCTCAAGTCTCCCACCGCCGCCGGCCCATCTTTCACCTTTGAAGAGGCCAGACTTCACTACCTGGAGCCATGGGCTAAGAGAAAGCGTTCCAAGCGTCCCCGATTTGACCACCCTTCATGTACTGAGGAAGAGTATCTTGCTCTCTGCCTCATCATGCTCGCTCGTGGAGGCGGCGCTGCTGTCAACACCTCCATTTCCACCGCCTCAGACCGCCATAGCTCCCCTCAGGCTCGGTCTACTCCTCCTCCTGTTTCATCTGAGACGGCGCCAGTAGCTGCCACCACAGACTCTACTGCCTCTGTCGAGCTTAGGTACAAGTGCTCTGTTTGCGACAAAGCCTTTTCCTCTTACCAGGCTCTTGGTGGACACAAGTCCAGTCATCGAAAGTTCGCTGGAGGTGCTGCCGCTGGTGAAGACCACTCTAGCTCCTCCGCCGTCACCACAACTTCTGCAAACACTACGACTACGACATCCAATGGTGGAGTTAAGACCCACGAGTGTTCCATCTGCCACAAGTGCTTCTCCACCGGACAGGCCTTGGGTGGACACAAGCGTTGCCACTATGAAGGCGGTGCTGGCGGCGGTAGCAGTGCTATCACTGCCTCCGAAGGTGTTGGTTCCACTCATACCATTAGCCACAGCCAGCGTGACTTCGATCTTAATCTCCCTGCCTTGCCGAACTTTTCACCAAAATTCTTCGTTTCATCAGGGGAGGACGAAGTTGAAAGCCCTCTGCCAGCGAAGAAGCCCCGACTTTTGATGACACCCAAGATTGAAATTGGTCAAGATCAATGA 810 0.5457 MALEALKSPTAAGPSFTFEEARLHYLEPWAKRKRSKRPRFDHPSCTEEEYLALCLIMLARGGGAAVNTSISTASDRHSSPQARSTPPPVSSETAPVAATTDSTASVELRYKCSVCDKAFSSYQALGGHKSSHRKFAGGAAAGEDHSSSSAVTTTSANTTTTTSNGGVKTHECSICHKCFSTGQALGGHKRCHYEGGAGGGSSAITASEGVGSTHTISHSQRDFDLNLPALPNFSPKFFVSSGEDEVESPLPAKKPRLLMTPKIEIGQDQ 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02189 269 SMART c2h2final6 170 192 IPR013087 -
Bach3g02189 269 SMART c2h2final6 110 132 IPR013087 -
Bach3g02189 269 MobiDBLite consensus disorder prediction 238 269 - -
Bach3g02189 269 MobiDBLite consensus disorder prediction 69 100 - -
Bach3g02189 269 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 33 229 IPR044653 GO:0003700
Bach3g02189 269 Gene3D Classic Zinc Finger 107 192 - -
Bach3g02189 269 Pfam C2H2-type zinc finger 109 134 - -
Bach3g02189 269 Pfam C2H2-type zinc finger 170 193 - -
Bach3g02189 269 ProSiteProfiles Zinc finger C2H2 type domain profile. 110 132 IPR013087 -
Bach3g02189 269 ProSitePatterns Zinc finger C2H2 type domain signature. 112 132 IPR013087 -
Bach3g02189 269 MobiDBLite consensus disorder prediction 145 167 - -
Bach3g02189 269 SUPERFAMILY beta-beta-alpha zinc fingers 110 192 IPR036236 -
Bach3g02189 269 ProSiteProfiles Zinc finger C2H2 type domain profile. 170 192 IPR013087 -
Bach3g02189 269 ProSitePatterns Zinc finger C2H2 type domain signature. 172 192 IPR013087 -
Bach3g02189 269 MobiDBLite consensus disorder prediction 134 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02189 Bach-Chr3 28949086 28949895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02189 1 265 C2H2 Transcription Factor Family AT1G27730 47.080 2.86e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach3g02189 zf-C2H2_6 2.2e-09 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02189 3 28949086 28949895 Bach12g00294 12 1960984 1961910 BWGD