Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02153 ATGAAGTCCATGAATGATAATAACAACGATGGGAATAATCATAACTGGTTGGGGTTCTCTCTTTCACCCCACATGAAAATGGAGGTTACTTCTTCTGTCCCTCACCATCTTCATCATAGTAATCAGTACCTTCATCAACCCCAACCTTCTGCTGCTGCTGTTTCTGTTCCAACAACTTTCTATTTGTCCCCTTCTCACCTAAGCACCTCTGGAATCTGTTATGGTGTCGGGGAAAATGGTGCTTTCCATTCTCCCTTGGCGGTAATGCCACTCAAATCCGATGGCTCGCTTTGTATAATGGAAGCACTCACTAGATCACAACAAGCGCAAGTTATGGTGCCGAGTTCCTCGCCGAAATTGGAGGACTTTCTAGGTGGTGCAACTATGGGGAGCCACGACTATGGTGGACATGAAAGAGAGGCAATGGCTCTGAGCTTAGACAGCATCTACTACAGCCATAATGCAGAGTCTCAAACCACCAGAGACCATTCTCTGGAGCTTCTTTCAGAACCCATCAAGCAACAAGCTGGGCATATCACGGTCCAACCCCACCTGTATTATTCTGGTCTTCCTTGCCATGGAATTTATCAAGCTCCATTGGAGGAAGATACCAAAGGCGCCCATGTTAGTGTCTGCGATTCCCAAATGCCTCGAATGGCGGGAGAAGGCATTGGTTGCATGAAAAACTGGGTGAACCCCAGAGAGTATTCCATTTCTTCTCAGCACCACCAGGCTCTGGTGCAACAAATGAATGGAAACATGGGTGATGATCGTGGAGCTTCTGTCTCTGCTGCTTCTGCTACCGATGGCTGTGTGGAATTGCAGTCTTTAAGTTTGTCTATGAGCCCTGGTTCTCAATCCAGTTGTGTAACGGCTCCACGGCAGATCTCACCCTCTGCAACCGACTCTGTGGCTGCTGTTGAAGGCAAGAAGAGAGGGGCTAGCAAGTTGAGCCAGAAGCAACCTGTGCATAGGAAATCCCTTGACACATTTGGCCAGAGAACGTCGCAGTATAGGGGAGTCACAAGGCACAGATGGACCGGCAGATATGAAGCTCATTTGTGGGATAATAGTTGCAAGAAGGAAGGGCAGACCAGGAAAGGAAGACAAGGGGGATATGATATGGAAGAGAAAGCTGCAAGGGCCTATGATCTCGCTGCCCTCAAGTATTGGGGACCATCAACCCACATAAACTTTCCGTTGGAAAATTACCAGACTGAACTTGAAGGAATGAAGAACATGAGCAGGCAAGAATATGTTGCTCACTTGAGAAGAAAAAGCAGTGGGTTCTCCAGAGGGGCTTCAATGTTCAGAGGAGTGACAAGGCACCACCAACATGGAAGATGGCAAGCGAGGATAGGCAGAGTTGCAGGAAACAAGGACCTTTATCTTGGGACATTCAGCACCCAAGAGGAAGCAGCTGAGGCATATGACATAGCGGCAATCAAATTCCGAGGGGTTAATGCTGTCACTAACTTTGACATTTCTAGATACGATGTTGAAAGGATAATTGCCAGCAATACTCTTCTAGCTGGGGAGCTAGCCAGACGAAACAAAGATAGTGAGCCAAGAGCTGAGACGTTGGAGTATAATGCATCGAGCGCTAGCAATGGGGAAGCAGTTCAAGGTGAAAACCACAACGCAAATGGCTCAGATTGGAAGATGGTTTCGTATCAAACTCCTCTGCAGCAAGAGTCCAATAGTTCTGAGCAGAAAAACATGGACTGCGGAAATTATAGAAATTCTGCTTTCTCCATGGCCCTACAAGATCTCATTGGGATTGATTCAGTGTGTTCTGGCCAGCCCATGCTAGATGACTCTGCCAAAATAGGGACTCATTTTTCAAACGCATCCTCGCTGGTGACCAGTTTAAGCAGTTCAAGGGAAGCCAGCCCTGATAAAACTGGCCCCACATTGCTCTTTCCAAAGCACCCACCGATGGCATCAAAGATTCTTAGCCCCATAGCTAGTGCTGCTGCGGCGGCTTCTTCTTGGTTTCCCTCCTCAGCAGCATCTCAACTAAGGCCAGCGTCAGCTATCTCTATGTCTCACTTGCCAGTTTTTGCTGCTTGGAATGACACCTGA 2085 0.4777 MKSMNDNNNDGNNHNWLGFSLSPHMKMEVTSSVPHHLHHSNQYLHQPQPSAAAVSVPTTFYLSPSHLSTSGICYGVGENGAFHSPLAVMPLKSDGSLCIMEALTRSQQAQVMVPSSSPKLEDFLGGATMGSHDYGGHEREAMALSLDSIYYSHNAESQTTRDHSLELLSEPIKQQAGHITVQPHLYYSGLPCHGIYQAPLEEDTKGAHVSVCDSQMPRMAGEGIGCMKNWVNPREYSISSQHHQALVQQMNGNMGDDRGASVSAASATDGCVELQSLSLSMSPGSQSSCVTAPRQISPSATDSVAAVEGKKRGASKLSQKQPVHRKSLDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQTELEGMKNMSRQEYVAHLRRKSSGFSRGASMFRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDISRYDVERIIASNTLLAGELARRNKDSEPRAETLEYNASSASNGEAVQGENHNANGSDWKMVSYQTPLQQESNSSEQKNMDCGNYRNSAFSMALQDLIGIDSVCSGQPMLDDSAKIGTHFSNASSLVTSLSSSREASPDKTGPTLLFPKHPPMASKILSPIASAAAAASSWFPSSAASQLRPASAISMSHLPVFAAWNDT 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02153 694 Pfam AP2 domain 337 392 IPR001471 GO:0003700|GO:0006355
Bach3g02153 694 Pfam AP2 domain 437 486 IPR001471 GO:0003700|GO:0006355
Bach3g02153 694 SUPERFAMILY DNA-binding domain 435 496 IPR016177 GO:0003677
Bach3g02153 694 ProSiteProfiles AP2/ERF domain profile. 337 400 IPR001471 GO:0003700|GO:0006355
Bach3g02153 694 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 112 568 - -
Bach3g02153 694 SMART rav1_2 337 406 IPR001471 GO:0003700|GO:0006355
Bach3g02153 694 SMART rav1_2 436 500 IPR001471 GO:0003700|GO:0006355
Bach3g02153 694 FunFam AP2-like ethylene-responsive transcription factor 435 496 - -
Bach3g02153 694 Gene3D AP2/ERF domain 436 496 IPR036955 GO:0003700|GO:0006355
Bach3g02153 694 Gene3D AP2/ERF domain 336 402 IPR036955 GO:0003700|GO:0006355
Bach3g02153 694 FunFam AP2-like ethylene-responsive transcription factor ANT 336 402 - -
Bach3g02153 694 SUPERFAMILY DNA-binding domain 336 402 IPR016177 GO:0003677
Bach3g02153 694 CDD AP2 435 496 IPR001471 GO:0003700|GO:0006355
Bach3g02153 694 CDD AP2 336 400 IPR001471 GO:0003700|GO:0006355
Bach3g02153 694 PRINTS Ethylene responsive element binding protein signature 338 349 IPR001471 GO:0003700|GO:0006355
Bach3g02153 694 PRINTS Ethylene responsive element binding protein signature 476 496 IPR001471 GO:0003700|GO:0006355
Bach3g02153 694 ProSiteProfiles AP2/ERF domain profile. 436 494 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02153 Bach-Chr3 28741243 28744634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02153 275 521 AP2-EREBP Transcription Factor Family AT4G37750 73.188 1.35e-135 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Bach3g02153 AP2 4.9e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02153 K09285 - qsa:O6P43_015953 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02153 3 28741243 28744634 Bach12g00335 12 2193767 2197721 BWGD
Bach3g02153 3 28741243 28744634 Bach3g02153 3 28741243 28744634 ECH