Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02148 ATGGTGGATCAATATGCGCTTGCTTGGATTCTAGGCACTATGCTGAGCCTTGTTGCGCTCTACAATTTGGTTTTCTCCAGGAAGAATCCTGTTGTTTCATTTGATGCCGGCGCACAGTGCATGAATAACATAACCACCGGTAACCGAGAATGCAGATCCACTAACCGCAATGGTGAGGTTGACGTCATTATCGTCGGCGCTGGTGTCGCCGGCGCGGCTCTGGCTCACACTCTTGGCAAGGATCGACGACGAATACATGTAATTGAAAGAGATCTCAGTGAGCCTGACCGAATAGTTGGGGAGTTACTACAACCTGGGGGATATCTGAAATTGATTGAGCTGGGACTTGAAGATTGCGTGGAGGAAATTGATGCTCAACGAGTGTTTGGTTATGCTCTTTTCAAGGATGGGAAAAATGCTCGACTGTCTTATCCCTTGGAGAAGTTCCACTCTGATGTCTCTGGCAGAAGTTTTCACAATGGGCGTTTTATTCAGAGGATGAGAGAGAAAGCTGCCTCTCTTCCGAATGTACAGTTGGAGCAAGGAACAGTCACTTCTCTAATTGAAGAGGAGGGAACAATTAAAGGTGTGAAATATAAGACTAAAGATGGCCAAGAATTCGTGTCATGTGCTCCCCTTACTATTGTCTGTGACGGTTGCTTCTCAAACTTGCGTCGTTCTCTCTGTAATCCTAAGGTCGATGTGCCCTCCTCTTTTGTGGGTTTAGTTTTGGAGAATTGTGAACTTCCATATGCAAATCATGGTCATGTCATACTAGCAGATCCCTCGCCAATTTTGTTCTACCCTATAAGTAGCACAGAGGTTCGATGTCTGGTTGATTTGCCTGGTATGAAAGTTCCTTCTATTTCAAATGGTGAAATGGCAAAATATTTGAAGACTATGGTGGCTCCACAGATTCCTCCCGAACTTTATGATGCCTTTGTGGCTGCAGTCGACAAAGGCAACATAAGAACAATGCCAAACAGAAGCATGCCAGCGGCTCCTTATCCGACCCCTGGAGCCCTTCTGATGGGAGATGCATTCAACATGCGCCATCCTCTCACTGGGGGCGGAATGACAGTGGCATTTTCTGATATAGTGGTGCTGCGGAATCTTCTGAGGCCTCTGCGCGACCTGAACGATGCATCTATGCTTTGTAAATATCTTGAATCCTTTTATACGTTGCGTAAGCCTGTGGCATCCACCATAAATACATTGGCAGGAGCCCTTTACAAGGTTTTCTGTGCATCACCGGATCAGGCTAGGAAGGAAATGCGTCAAGCTTGCTTTGATTATCTTAGTCTTGGAGGTGTATTCTCGGAAGGACCAGTCTCTTTACTTTCGGGATTAAACCCTCGGCCTATGAGTTTGGTTCTCCATTTCTTTGCCGTTGCAATATACGGTGTTGGCCGATTACTGCTGCCTTTTCCTTCACCTAAACGGATATGGATTGGGGCTAGATTAATCTCTAGTGCTTCAGGAATAATCTTCCCCATAATCAAGGCAGAAGGAGTTCGTCAAATGTTCTTCCCTGCTACAGTTCGAGCTTATTACAGAACTCCCCCGGCTAAATAG 1575 0.4597 MVDQYALAWILGTMLSLVALYNLVFSRKNPVVSFDAGAQCMNNITTGNRECRSTNRNGEVDVIIVGAGVAGAALAHTLGKDRRRIHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEEIDAQRVFGYALFKDGKNARLSYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLIEEEGTIKGVKYKTKDGQEFVSCAPLTIVCDGCFSNLRRSLCNPKVDVPSSFVGLVLENCELPYANHGHVILADPSPILFYPISSTEVRCLVDLPGMKVPSISNGEMAKYLKTMVAPQIPPELYDAFVAAVDKGNIRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVAFSDIVVLRNLLRPLRDLNDASMLCKYLESFYTLRKPVASTINTLAGALYKVFCASPDQARKEMRQACFDYLSLGGVFSEGPVSLLSGLNPRPMSLVLHFFAVAIYGVGRLLLPFPSPKRIWIGARLISSASGIIFPIIKAEGVRQMFFPATVRAYYRTPPAK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02148 524 Pfam Squalene epoxidase 211 483 IPR013698 GO:0004506|GO:0016020|GO:0050660
Bach3g02148 524 PANTHER SQUALENE MONOOXYGENASE 26 522 IPR040125 GO:0004506|GO:0016126
Bach3g02148 524 FunFam Squalene monooxygenase 2 54 434 - -
Bach3g02148 524 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 338 353 - -
Bach3g02148 524 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 61 83 - -
Bach3g02148 524 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 210 225 - -
Bach3g02148 524 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 353 369 - -
Bach3g02148 524 Gene3D - 52 441 IPR036188 -
Bach3g02148 524 SUPERFAMILY FAD/NAD(P)-binding domain 60 434 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02148 Bach-Chr3 28705550 28709205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02148 43 522 Miscellaneous Gene Families AT1G58440 80.498 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02148 K00511 - qsa:O6P43_015949 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02148 3 28705550 28709205 Bach12g00338 12 2226690 2230484 BWGD
Bach3g02148 3 28705550 28709205 Bach3g02148 3 28705550 28709205 ECH