Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02140 ATGGGACGTGCTTCTGCTGGAGATGACAACATTATAATAAACCCCACATTTGATGATGGCCTGAATAACTGGTCCGGAAGAGGCTGTAAGATTGTATTACATGATTCCATGGGAGACGGTAAAATTCTGCCAAAGTCTGGGAAATTCTTTGCATCTGCAACAGAGCGCACGCAAAGCTGGAATGGAATTCAGCAGGAGATCACTGGGAGAGTGCAACGCAAGCTTGCGTTTGAAGTCACTGCGTTAGTACGGATATACGGGAACAATGTCACTACTGCTGACGTAAGGGCTACTTTGTGGGTCCAAGCAAAAGATCTCCGCGAGCAGTACATAGGCATTGCCAATGTGCAGGCCACAGACAAAGACTGGGCTCAGTTGCGAGGAAAGTTTCTTCTAAATGGTTCTCCATCAAAAGTGGTAATTTATTTAGAAGGTCCTGCTCCTGGCACTGACATTCTTATGAATACTTTGGTCGTAAAGCACGCAGCTAAGTCACCTCCTTCAACACCACCAGATATTCAGAATGCTGGGTTTGGGATTAATATAATTGAGAACTTCAATTTGTTTGACGGCTCCAAAGGGTGGTTCCCTCTTGGGAATTGCACTTTAAACGTAGAAAATGGTTCACCTCATATAATTCCACCAATGGCAAGAGACTCCCTTGGGCTTCATGAACCCTTAAGTGGGCGCTACATCCGCGTGACCAACCGCACACAAAATTGGATGGGTCCTGCTCAAATGATCACTGATAAATTCAAACTCTTTCTGACTTACCAAGTATCAGCTTGGGTTCGGATTGGTTCAGGATCAAGTGGTCCACAGAATGTGAATGTTGCCCTTGGTGTTGACAACCAGTGGGTCAATGGAGGACAAGCTGAGGTTGCTGATGATAGATGGCATGAAATTGGTGGGTCCTTCAGAATCGAGAAGCAACCATCAAAGGTTATGGTTTATGTCCAAGGTCCTGCTCCAGGTGTAGACTTAATGCTTGCTGGACTTCAGATTTTCCCTGTTGATAGACATGAAAGGTTTAAACAATTAAGGAGGCAGACAGACAAGATCCGTAAGCGTGATGTTATTCTGAAATTCTCTGGATTGGACTCGAGCAGCTATCTGGGAACCATGGTGAAAGTCAAACAAATACAGAATGATTTTCCACTTGGAACATGTATCAACAGAACAAATATTGAGAACGAAGATTTTGTTGACTTCTTTGTGAAACATTTTAATTGGGCTGTGTTTGGGAATGAGCTTAAGTGGTATTGGACAGAGTCACAGCAAGGAAATTTCAACTACAAGGATGCTGATGAGATGTTAGACTTGTGTCAGAAACACAACATAGAAACTCGCGGTCATTGTATCTTTTGGGAAGTGGATGGTGCTGTTCAGCAATGGGTTAAATCCCTGAATAAGAATGACTTAATGACTGCTGTCCAGAATCGCTTAAACGGCCTTCTGACTCGCTACAAGGGCAAGTTTAAGCACTATGATGTAAATAATGAGATGATGCACGGTTCATTTTATCAAGATAAACTTGGTAAAGATATCAGGGCAAACATGTTCAAGACTGCACACCAACTAGATCCTTCTCCAACACTGTTTGTGAATGACTATCATGTTGAAGATGGATGTGACACCAAATCATGTCCAGAAAAATACATGCAACATGTTCTTGATTTGCAAGAGCAAGGTGCACCTGTTGGAGGAGTAGGACTTCAAGGTCATATAGACAGTCCAGTAGGCCCAGTTGTTTGTTCTGCTCTTGACAAATTGGGTATTCTGGGTTTACCACTCTGGTTTACAGAGCTTGATGTTTCCTCCATCAATGAATATGTGAGAGCAGATGATTTAGAAGTTATGATGCGGGAAGCTTTTGCTCACCCTGCAGTTGAGGGTATCATGCTGTGGGGATTTTGGGAATTGTTTATGAGCAGGGATAATTCCCACTTAGTGAATGCAGAAGGTGATATCAATGAAGCTGGAAAAAGATACCTTGCTATTAGAGAAGAGTGGCTGACACGCAGCCATGGTCATGTTGATGCGCAGGGACAGTTCAACTTCCGAGGCTTCCATGGAACATATAACGTGGAAGTTGTCACCTCATCTAAGAAGAAGATTTCTAAGACATTTGTTGTTGACAAGGGTGATTCGCCATTGGTGGTATCCATTGACGCATAA 2178 0.4316 MGRASAGDDNIIINPTFDDGLNNWSGRGCKIVLHDSMGDGKILPKSGKFFASATERTQSWNGIQQEITGRVQRKLAFEVTALVRIYGNNVTTADVRATLWVQAKDLREQYIGIANVQATDKDWAQLRGKFLLNGSPSKVVIYLEGPAPGTDILMNTLVVKHAAKSPPSTPPDIQNAGFGINIIENFNLFDGSKGWFPLGNCTLNVENGSPHIIPPMARDSLGLHEPLSGRYIRVTNRTQNWMGPAQMITDKFKLFLTYQVSAWVRIGSGSSGPQNVNVALGVDNQWVNGGQAEVADDRWHEIGGSFRIEKQPSKVMVYVQGPAPGVDLMLAGLQIFPVDRHERFKQLRRQTDKIRKRDVILKFSGLDSSSYLGTMVKVKQIQNDFPLGTCINRTNIENEDFVDFFVKHFNWAVFGNELKWYWTESQQGNFNYKDADEMLDLCQKHNIETRGHCIFWEVDGAVQQWVKSLNKNDLMTAVQNRLNGLLTRYKGKFKHYDVNNEMMHGSFYQDKLGKDIRANMFKTAHQLDPSPTLFVNDYHVEDGCDTKSCPEKYMQHVLDLQEQGAPVGGVGLQGHIDSPVGPVVCSALDKLGILGLPLWFTELDVSSINEYVRADDLEVMMREAFAHPAVEGIMLWGFWELFMSRDNSHLVNAEGDINEAGKRYLAIREEWLTRSHGHVDAQGQFNFRGFHGTYNVEVVTSSKKKISKTFVVDKGDSPLVVSIDA 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02140 725 FunFam Glycosyl hydrolase family 10 protein 5 161 - -
Bach3g02140 725 FunFam Endo-1,4-beta-xylanase A 373 675 - -
Bach3g02140 725 Gene3D - 4 162 - -
Bach3g02140 725 Gene3D - 178 336 - -
Bach3g02140 725 Pfam Carbohydrate binding domain 181 324 IPR003305 GO:0016798
Bach3g02140 725 Pfam Carbohydrate binding domain 9 148 IPR003305 GO:0016798
Bach3g02140 725 Pfam Glycosyl hydrolase family 10 380 638 IPR001000 GO:0004553|GO:0005975
Bach3g02140 725 SUPERFAMILY (Trans)glycosidases 374 674 IPR017853 -
Bach3g02140 725 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 372 667 IPR001000 GO:0004553|GO:0005975
Bach3g02140 725 SUPERFAMILY Galactose-binding domain-like 179 340 IPR008979 -
Bach3g02140 725 SUPERFAMILY Galactose-binding domain-like 8 162 IPR008979 -
Bach3g02140 725 SMART glyco_10 418 668 IPR001000 GO:0004553|GO:0005975
Bach3g02140 725 Gene3D Glycosidases 372 676 - -
Bach3g02140 725 PANTHER GLYCOSYL HYDROLASE 167 717 IPR044846 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02140 Bach-Chr3 28633795 28636301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02140 1 724 Glycoside Hydrolase AT1G58370 73.931 0.0 1160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02140 - - pcin:129303045 1284.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02140 3 28633795 28636301 Bach12g00347 12 2294766 2299117 BWGD
Bach3g02140 3 28633795 28636301 Bach3g02140 3 28633795 28636301 ECH