Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00338 ATGGATCAATATGCTCTCGCTTGGATTCTAGGCCCCGTGCTGAGCCTTGCTGCGTTTTACAAATTGGTTTTCGCCAGGAAGAACCCTAGCGTTTCATCAGATGCCGCCGCACAGTGCACTAAGAGCATAATCTCTGGTAACGGAGAATGCAGATCCACTAACCGCAATGACGAGATTGACGTCATCATCGTCGGCGCTGGTGTCGCGGGCGCGGCTCTTGCTTACACTCTTGGCAAGGATGGACGTCGAGTACATGTAATTGAAAGAGATCTCAGCGAGCCTGACCGCATAGTTGGGGAGTTGCTACAACCTGGGGGATATCTGAAATTAATTGAGCTGGGGCTTGAAGATTGTGTGAAGGACATTGATGCTCAGCGAGTGTTTGGTTATGCTCTTTTCAAGGATGGGAAAAATACACGACTCTCTTATCCCTTGGAGAAGTTCCACTCTGATGTCTCTGGCAGAAGCTTTCACAATGGGCGTTTTATTCAGAGGATGAGGGAGAAGGCTGCCTCTCTTCCCAATGTACAGTTGGAGCAAGGAACAGTCACTTCCCTGATCGAAGAAGAAGGAACAGTAAAAGGTGTGCAATACAAGACTAAAGATGGCCAGCAATTCGTGTCACATGCTCCACTTACCATTGTTTGTGATGGCTGCTTCTCAAACTTGCGTCGATCTCTTTGTAATCCTAAGGTAGATGTGCCCTCCTGTTTTGTTGGTTTAGTTTTGGAGAATTGTGAACTTCCTTATGCAAATCATGGTCATGTTATACTAGCAGATCCCTCGCCAATGTTGTTCTACCCTATAAGTAGTACAGAGGTTCGCTGTCTGGTTGATGTGCCAGGTCAGAAAGTTCCTTCTATTTCAAATGGTGAAATGGCGAAGTATTTGAAGACTGTGGTGGCTCCACAGATTCCTCCTGAACTTTATGATGCCTTTGTAGCTACAGTTGATAAAGGCAACATACGGACGATGCCAAACAGAAGCATGCCAGCGGCTCCGTATCCTACCCCTGGAGCCCTTCTGATGGGAGATGCATTCAACATGCGCCATCCTCTCACTGGGGGAGGAATGACAGTAGCATTGTCTGATATAGTGGTGCTGCGGAATCTTCTCAGGCCTCTGCGTGACCTGAATGACGCGTCCACACTTTGTGAATATCTTGAATCGTTTTATACCTTGCGTAAGCCTGTGGCATCCACCATAAATACATTGGCAGGAGCCCTTTACAAGGTTTTCTGTGCATCACCGGATGAGGCTAGGAAGGAAATGCGTCAAGCTTGCTTTGATTATCTTAGTCTTGGAGGTATATTCTCAGAAGGACCCGTCTCTTTGCTTTCGGGTTTAAACCCTCGGCCGATAAGCTTGGTTCTCCATTTCTTTGCCGTTGCAATATACGGTGTTGGCCGTTTACTGCTACCATTTCCTTCTCCTAAACGGATATGGATTGGGGCCCGATTAATCTCTGGTGCTTCAGGAATCATCTTCCCCATAATTAAAGCAGAAGGAGTTCGTCAAATGTTCTTTCCTGCAACTGTGCCAGCTTATTACAGGACTCCCCCGGCTAAATAAAAGTGGAAATCACCATATTCAAAATTCCTAACAGTTCTGTTCTGAAGATTCACGCTTCAATGATGAGATACGTATACATTTCGGCGTCTGTATAGTATACATTTTTAAGATGTTTATACTTGCATTACTATCATAAAGTACATGTGGTTCTTTTCTCGTCTACTTCTAATTTAACCTTAATAAGC 1757 0.4542 MDQYALAWILGPVLSLAAFYKLVFARKNPSVSSDAAAQCTKSIISGNGECRSTNRNDEIDVIIVGAGVAGAALAYTLGKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVKDIDAQRVFGYALFKDGKNTRLSYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVQLEQGTVTSLIEEEGTVKGVQYKTKDGQQFVSHAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCELPYANHGHVILADPSPMLFYPISSTEVRCLVDVPGQKVPSISNGEMAKYLKTVVAPQIPPELYDAFVATVDKGNIRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLRPLRDLNDASTLCEYLESFYTLRKPVASTINTLAGALYKVFCASPDEARKEMRQACFDYLSLGGIFSEGPVSLLSGLNPRPISLVLHFFAVAIYGVGRLLLPFPSPKRIWIGARLISGASGIIFPIIKAEGVRQMFFPATVPAYYRTPPAK 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00338 523 Gene3D - 51 439 IPR036188 -
Bach12g00338 523 SUPERFAMILY FAD/NAD(P)-binding domain 59 433 IPR036188 -
Bach12g00338 523 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 209 224 - -
Bach12g00338 523 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 60 82 - -
Bach12g00338 523 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 337 352 - -
Bach12g00338 523 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 352 368 - -
Bach12g00338 523 FunFam Squalene monooxygenase 2 53 433 - -
Bach12g00338 523 Pfam NAD(P)-binding Rossmann-like domain 63 89 - -
Bach12g00338 523 PANTHER SQUALENE MONOOXYGENASE 40 521 IPR040125 GO:0004506|GO:0016126
Bach12g00338 523 Pfam Squalene epoxidase 209 482 IPR013698 GO:0004506|GO:0016020|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00338 Bach-Chr12 2226690 2230484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00338 16 521 Miscellaneous Gene Families AT1G58440 77.866 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00338 K00511 - qsa:O6P43_015949 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02148 3 28705550 28709205 Bach12g00338 12 2226690 2230484 BWGD
Bach12g00338 12 2226690 2230484 Bach12g00338 12 2226690 2230484 ECH