Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00335 GAGAGAGAGAGAGAGGTGATGCGAATGAATGTGAAGGCGTGCACAGGACGAAGAGTAGGTTTCGTTGGTAGAGAAATTTGCTGTAGCTAGACAACAAAAGCCAAGTCTTCATATGCAGGAGGGCAAAGAGATTTTCGTTATGATTAGTTTATTTGCTACCCAATGATTGACTTGCCCTGCTGCTACGATAGATACTGGTAGCAAGTTCAAACCTTTAGAAGTAAGAAAAAGCAAGAAAGAGAGAGAAAGAACGAAGTAGTAGAAGATGAAGTCCATGAATGATGATAACAACGATGGGAATAACAATCATAACTGGTTGGGGTTCTCTCTTTCACCACACATGAAAATTGAGGTTACTTCTTCTGTACCTCAACAACATCAGTACCATCATCAACCCCATACTTCTGTTGATGCTGTTTCTAGTGCTGTTCCTGTTCATGTTCCAACAACTTTCTATTTGTCCCCTTCTAACGTAAGCACCTCTGGAATATGCTATGGTGTTGGGGAAAATGGTGCTTTCCATTCTCCCTTGGCTGGAATGCCACTCAAGTCTGATGGCTCGCTTTGTATAATGGAAGCCCTCACTAGATCACAAACACAAGTTATGGTGCCGAGTTCTTCGCCTAAACTGGAGGACTTTCTAGGTGGTGCAACTATGGGAAGCCACGAGTATGGTGGTCATGAAAGAGAGGCAATGGCGCTGAGCTTGGACAGCATCTACTACAGCCAAAATGCTGAGTCTCAAACTAGCAGAGACCATTCTCTGGAACTTCTCTCAGACCCCTTCAAGCAACAAGCTGGGCATGTCAACGTGCAACCACATCTATATTATTCGGGACTTGCTTGCCATGGCATTTATCAAACTCCACTAGAGGAAGATACCAGGGGCACCCATGTTACTGTCTGCGACTCACAAATGTCTCAAATGGCGGATGAAGGAATTGGTTGCATGAAAAACTGGGTGAGCCCGAGAGAGTATTCTATTTCTTCCCATCACCACCATGCTCTGGATCAGCAAATGAATGATACTATGGGTGCCGATCGCGGAGCTTCTGGTTCTGCTGCTACTGCTACTGCTACAGTCGGCTGTGGGGACTTGCAGTGTTTAACTTTGTCTATGAGTCCTGGTTCTCAGTCTAGTTGTGTGACAGCTCAGCAGCAGATCTCACCCTCCGGCACCGATTCCGTGGCTGCTCTTGAAGGTAAGAAGAGAGCAGCTAGCAAGTCGAGCCAGAAACAACCTGTGCATAGGAAATCGATAGACACATTTGGCCAGAGAACGTCGCAGTATAGGGGAGTCACAAGGCATAGATGGACCGGTAGATATGAAGCTCATTTGTGGGATAATAGTTGCAAGAAGGAGGGGCAGACAAGGAAAGGAAGACAAGTTTATTTGGGGGGGTATGATATGGAAGAGAAAGCTGCAAGAGCCTATGATCTCGCTGCCCTTAAGTATTGGGGACCCTCAACCCACATAAACTTTCCGTTGGAAAATTACCAGGCAGAACTTGAAGAAATGAAGAACATGAACAGGCAAGAATATGTTGCCCACTTGAGAAGAAAAAGCAGTGGGTTCTCCAGAGGTGCTTCAATGTACAGGGGAGTGACAAGGCACCACCAGCATGGAAGATGGCAAGCAAGGATAGGCAGAGTCGCAGGAAACAAGGACCTTTATCTTGGGACATTCAGCACCCAAGAGGAAGCAGCTGAAGCATATGATATAGCTGCAATCAAATTCCGTGGTGTTAATGCTGTCACCAACTTTGATATATCTAGATATGATGTTGAAAGGATCATTGCCAGCAATACTCTACTAGCTGGGGAGCTTGCCAGGCGAAACAAAGATAGTGAACCAAGAAATGAGGCCTTTGAGTCTAATGCATCGAGGGCTGGCAATAGGGAAAGGATTCAAGGTGGAGGCAATAATGAAAGTGGTTCAGATTGGAAGATGGTTTTGTGTGAAACTCCTCCACAGCAAGAGTCAAATGGTTGCGAGCAGAAAAACATTAACTGCGGAAATTATAGAAATTCTGCTTTCTCTATGGCCCTACAAGATCTCGTTGGGATTGATTCAGTAGGTTCAGGCCAGCCCATGCTAGATGACCCTGCCAAAATTGGGACTCATTTTTCAAACATATCCTCGCTGGTCACCAGTCTTAGCAGTTCAAGAGAGGCCAGCCCTGATAAAACTGGCCCCACATTGCTCTTTCCAAAGCCTCCTATAGCATCTTCAAAGATTGTTAGCCCCATTGCTAGTGCTGCGGTTACTTCTTGGTTTCCTTCTTCAGCAGCAGCTCAACTGAGGCCAGCTTCCGCTATCCCCATATCTCACTTGCCAGTTTTTGCGGCTTGGAATGACACCTAAACACAAGCACTTCTTTTGACAGAAAGTTTAAATTTTGCGTGTAAAAGTGTGTGGGGGAAAGGAGGTGGAGAGGGGATGAAAAGAAGAAGCTGGGGGCAGGAAATTATTGATGTGATAAAAAGTAGTAGATATTTTGGGGTAACATTCTGCATGTTTTACTATGGCGTTAGTGGAGGAATATGGGGGATCCATGAAAGATAGGTGGGGTCCAGTTTTCTGTAAGATGTCTGTATCCAAGTGTAACAAAAACCTTTCCAAACATGGCCTTTTGGATTTATATTGAGATGGAGATATGGAAATTGGAGTGAAA 2675 0.4512 MKSMNDDNNDGNNNHNWLGFSLSPHMKIEVTSSVPQQHQYHHQPHTSVDAVSSAVPVHVPTTFYLSPSNVSTSGICYGVGENGAFHSPLAGMPLKSDGSLCIMEALTRSQTQVMVPSSSPKLEDFLGGATMGSHEYGGHEREAMALSLDSIYYSQNAESQTSRDHSLELLSDPFKQQAGHVNVQPHLYYSGLACHGIYQTPLEEDTRGTHVTVCDSQMSQMADEGIGCMKNWVSPREYSISSHHHHALDQQMNDTMGADRGASGSAATATATVGCGDLQCLTLSMSPGSQSSCVTAQQQISPSGTDSVAALEGKKRAASKSSQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQAELEEMKNMNRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDISRYDVERIIASNTLLAGELARRNKDSEPRNEAFESNASRAGNRERIQGGGNNESGSDWKMVLCETPPQQESNGCEQKNINCGNYRNSAFSMALQDLVGIDSVGSGQPMLDDPAKIGTHFSNISSLVTSLSSSREASPDKTGPTLLFPKPPIASSKIVSPIASAAVTSWFPSSAAAQLRPASAIPISHLPVFAAWNDT 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00335 699 MobiDBLite consensus disorder prediction 304 331 - -
Bach12g00335 699 Pfam AP2 domain 341 399 IPR001471 GO:0003700|GO:0006355
Bach12g00335 699 Pfam AP2 domain 444 493 IPR001471 GO:0003700|GO:0006355
Bach12g00335 699 SUPERFAMILY DNA-binding domain 442 503 IPR016177 GO:0003677
Bach12g00335 699 ProSiteProfiles AP2/ERF domain profile. 443 501 IPR001471 GO:0003700|GO:0006355
Bach12g00335 699 PRINTS Ethylene responsive element binding protein signature 483 503 IPR001471 GO:0003700|GO:0006355
Bach12g00335 699 PRINTS Ethylene responsive element binding protein signature 342 353 IPR001471 GO:0003700|GO:0006355
Bach12g00335 699 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 114 570 - -
Bach12g00335 699 MobiDBLite consensus disorder prediction 535 556 - -
Bach12g00335 699 SUPERFAMILY DNA-binding domain 340 409 IPR016177 GO:0003677
Bach12g00335 699 ProSiteProfiles AP2/ERF domain profile. 341 407 IPR001471 GO:0003700|GO:0006355
Bach12g00335 699 MobiDBLite consensus disorder prediction 522 558 - -
Bach12g00335 699 Gene3D AP2/ERF domain 443 503 IPR036955 GO:0003700|GO:0006355
Bach12g00335 699 Gene3D AP2/ERF domain 340 409 IPR036955 GO:0003700|GO:0006355
Bach12g00335 699 SMART rav1_2 341 413 IPR001471 GO:0003700|GO:0006355
Bach12g00335 699 SMART rav1_2 443 507 IPR001471 GO:0003700|GO:0006355
Bach12g00335 699 CDD AP2 340 407 IPR001471 GO:0003700|GO:0006355
Bach12g00335 699 FunFam AP2-like ethylene-responsive transcription factor ANT 340 409 - -
Bach12g00335 699 FunFam AP2-like ethylene-responsive transcription factor 442 503 - -
Bach12g00335 699 Coils Coil 408 428 - -
Bach12g00335 699 CDD AP2 442 503 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00335 Bach-Chr12 2193767 2197721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00335 281 523 AP2-EREBP Transcription Factor Family AT1G72570 73.251 1.80e-126 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Bach12g00335 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00335 K09285 - qsa:O6P43_015953 966.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02153 3 28741243 28744634 Bach12g00335 12 2193767 2197721 BWGD
Bach12g00335 12 2193767 2197721 Bach12g00335 12 2193767 2197721 ECH