Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00294 CTCTGTTTCACTCTTGTTGTTTAAGCGTATCTTTGGTTTAGATCAGATGGCTCTGGAAGCTCTCAAATCTCCCACCACCGCCGGCCCATCCTTCAGTTTTGAAGACGCCAGCCTTCATTACCTGGAGCCGTGGGCTAAGCGAAAGCGTTCCAAGCGTACCCGACTTGACCACCCTTCATGCTCCGAGGAAGAGTATCTCGCTCTCTGCCTCATCATGCTCGCTCGTGGCGGGAGCGCTGCTGTCTCCACCGCCGTTTCCACAGCCTCAGACCGCCATAGCTCCCCTCAGACTCTGCCTACTCCTCCTCCTGTTTCATCTCAGTCGGCGCCAGTAGCCACCACAGACTCCCCCGCTACTGTCAAGCTCAGTTACAAATGCTCTGTTTGCAATAAAGCCTTCTCCTCTTACCAAGCTCTTGGTGGACACAAGGCCAGTCATCGAAAACTCGCTGGGGGTGAAGACCACTCTGCCTCCTCCGCCGTCACCACAACTTCTGCAAACACTACAACGACAACATCCAACGGTGGAGGTAAGACTCACGAGTGTTCAATCTGCCACAAGTGCTTCCCCACCGGACAGGCCTTGGGTGGGCACAAGCGTTGCCACTATGAGGGCGGTGCTGGCGGCGGTGGCAATGCTAACACTGCCTCGGAAGGTGTTGGTTCCACTCATACCATCAGCCATAGCCACCGTGACTTCGATCTCAACCTCCCTGCCTTGTCGGAATTCTCACCAAAATTATTGGTTGCGTCAATGGACGACGAAGTCGAAAGCCCTTTGCCAGCGAAGAAGCCCCGCCTTTTCATGACACCCAAGATTGAAATTGCTCAAGATCAGTGAATGGCTCTGGAAGCTCTCAAATCTCCCACCACCGCCGGCCCATCCTTCAGTTTTGAAGACGCCAGCCTTCATTACCTGGAGCCGTGGGCTAAGCGAAAGCGTTCCAAGCGTACCCGACTTGACCACCCTTCATGCTCCGAGGAAGAGTATCTCGCTCTCTGCCTCATCATGCTCGCTCGTGGCGGGAGCGCTGCTGTCTCCACCGCCGTTTCCACAGCCTCAGACCGCCATAGCTCCCCTCAGACTCTGCCTACTCCTCCTCCTGTTTCATCTCAGTCGGCGCCAGTAGCCACCACAGACTCCCCCGCTACTGTCAAGCTCAGTTACAAATGCTCTGTTTGCAATAAAGCCTTCTCCTCTTACCAAGCTCTTGGTGGACACAAGGCCAGTCATCGAAAACTCGCTGGGGGTGAAGACCACTCTGCCTCCTCCGCCGTCACCACAACTTCTGCAAACACTACAACGACAACATCCAACGGTGGAGGTAAGACTCACGAGTGTTCAATCTGCCACAAGTGCTTCCCCACCGGACAGGCCTTGGGTGGGCACAAGCGTTGCCACTATGAGGGCGGTGCTGGCGGCGGTGGCAATGCTAACACTGCCTCGGAAGGTGTTGGTTCCACTCATACCATCAGCCATAGCCACCGTGACTTCGATCTCAACCTCCCTGCCTTGTCGGAATTCTCACCAAAATTATTGGTTGCGTCAATGGACGACGAAGTCGAAAGCCCTTTGCCAGCGAAGAAGCCCCGCCTTTTCATGACACCCAAGATTGAAATTGCTCAAGATCAGTGAATTGGCCCGAATTTTTGTCAGAATTCATTAGGATCTTAATTAGATTGAAATATCAATTCTCAGTCCATTTTTAATTTTCATTTCTC 1722 0.536 MALEALKSPTTAGPSFSFEDASLHYLEPWAKRKRSKRTRLDHPSCSEEEYLALCLIMLARGGSAAVSTAVSTASDRHSSPQTLPTPPPVSSQSAPVATTDSPATVKLSYKCSVCNKAFSSYQALGGHKASHRKLAGGEDHSASSAVTTTSANTTTTTSNGGGKTHECSICHKCFPTGQALGGHKRCHYEGGAGGGGNANTASEGVGSTHTISHSHRDFDLNLPALSEFSPKLLVASMDDEVESPLPAKKPRLFMTPKIEIAQDQ 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00294 264 Gene3D Classic Zinc Finger 107 187 - -
Bach12g00294 264 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 32 225 IPR044653 GO:0003700
Bach12g00294 264 MobiDBLite consensus disorder prediction 141 164 - -
Bach12g00294 264 MobiDBLite consensus disorder prediction 70 97 - -
Bach12g00294 264 Pfam C2H2-type zinc finger 165 188 - -
Bach12g00294 264 Pfam C2H2-type zinc finger 109 133 - -
Bach12g00294 264 ProSiteProfiles Zinc finger C2H2 type domain profile. 165 187 IPR013087 -
Bach12g00294 264 MobiDBLite consensus disorder prediction 132 164 - -
Bach12g00294 264 SMART c2h2final6 109 131 IPR013087 -
Bach12g00294 264 SMART c2h2final6 165 187 IPR013087 -
Bach12g00294 264 SUPERFAMILY beta-beta-alpha zinc fingers 109 187 IPR036236 -
Bach12g00294 264 ProSitePatterns Zinc finger C2H2 type domain signature. 167 187 IPR013087 -
Bach12g00294 264 ProSitePatterns Zinc finger C2H2 type domain signature. 111 131 IPR013087 -
Bach12g00294 264 ProSiteProfiles Zinc finger C2H2 type domain profile. 109 131 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00294 Bach-Chr12 1960984 1961910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00294 1 260 C2H2 Transcription Factor Family AT1G27730 49.259 1.67e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach12g00294 zf-C2H2_6 3.6e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00294 - - qsa:O6P43_015998 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02189 3 28949086 28949895 Bach12g00294 12 1960984 1961910 BWGD
Bach12g00294 12 1960984 1961910 Bach12g00294 12 1960984 1961910 ECH