Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01257 ATGAAGTGGATCAACAGTGATAGTAACAATCATCACGCCTGGTTGGGCTTCTCTCTCTCACCCCATCACATGAAATTCGACCTTCCTAATTCTTCTTCTTCTTCTACTACTACTACTTCTTCCTCCTCCTCCTGCGGTGGAGATCACAGTGCTGCCTTTCATTCTCAGTTGAGCGTGATGCCTCTCAAGTCAGACGGTTCACTTTGCATCATGGAAGCTCTCACTAGATCACATCAAACGCAACAAGTGATGGTTGGTAGTTCGTCTCCGAAGCTGGAAGACTTTCTGGGTGGTGCAAGCATGGGAACACACGAAAGAGAGGCCATTGACACTATCTACTACCCTCCTCATAGAGGCTTTCTCTCAGAGCCTTTGAGGCATCCACCATATTACTCCTTTGCCTGCCATGGCATGTACCAAGCACCACCCCCAACAATGCCCCACATAGCAGAAGCAGAAGAAGAAGAAGAAGAAGGCATTGATGGATTCAAGAAGTGGGTGGAGCAGCAGCAGCAGCAACAGTCGCTGAGTCTGTCAATGAGTCCAGGGTCGGAGTCAAGTTGTGTAACAGCTGCGAAGCATGAGAATGGGAAGAGTGAGTCGTCGGTGGTGGCAGTAACAGTAATGGAGAATAGCAACAAGAAGAGAGGGCTAGCTAACAAGCAACCAGTTCACAGAAAATCCATTGACACTTTTGGTCAGAGAACTTCTCAGTATCGAGGCGTCACCAGGCATAGATGGACTGGTAGATACGAAGCACATTTATGGGATAACACTTGCAAGAAGGAAGGCCAAACTAGGAAAGGAAGACAGGTGTATTTGGGGGGTTATGATATGGAACAAAAAGCTGCAAGAGCCTATGATCTTGCTGCCCTTAAGTACTGGGGACCTTCAACCCACATCAATTTTCCGTTGGAAAATTACCAAGCGGAACTTGAGGAGATGAAGAACATGACCAGGCAGGAATATGTCGCCCACTTGAGAAGAAAAAGCAGTGGATTTTCTAGGGGTGCTTCAATATACAGAGGGGTGACAAGACATCATCAACATGGAAGATGGCAAGCAAGGATTGGCAGAGTTGCTGGGAACAAGGACCTTTACCTTGGGACATTCAGCACTCAAGAGGAGGCAGCAGAAGCATATGATGTAGCAGCAATCAAGTTCCGTGGTTCCAATGCAGTTACAAACTTTGACATATCAAGATACGACGTGGAAAGAATCATGGGGAGTAACACTTTGCTTGCAGGGGAGCTAGCTAGGCGAAACAACAAAGATACTGCTATTGACCCACCAAGATGGGAGGCCATTGAATACAACACGAATGTGGAAGCAGTTCAAGCTAGAAACAACAACAATGACAATACTAATAATAACAATGATGTTGATTCAAACTGGAAGATGGTTTCTGGTGGTGCTTTCTCTGTGGGGATACATGATCTGATTGGGATTGAAGGGCAGCAGCCATTGATGGAGGCTTCTTCGCTTGTGACCAGCCTAAGCAGCTCAAGAGAGGCTAGCCCTGAAAAAATAATGGGTCCCTCGTCAATGATGTTTCCAAAACCTCTTCAACTTGAACCCAAGATGGTTCTTAACAACCCCTTAACTAGTACTGGTGTTGTTGGATCTTGGTTCCCTTCTCAAATGAGGCCAGCTTCTTTGTCTCACTTGCCTGTTTTTGCTGCTTGGAACGATACCTAG 1698 0.4635 MKWINSDSNNHHAWLGFSLSPHHMKFDLPNSSSSSTTTTSSSSSCGGDHSAAFHSQLSVMPLKSDGSLCIMEALTRSHQTQQVMVGSSSPKLEDFLGGASMGTHEREAIDTIYYPPHRGFLSEPLRHPPYYSFACHGMYQAPPPTMPHIAEAEEEEEEGIDGFKKWVEQQQQQQSLSLSMSPGSESSCVTAAKHENGKSESSVVAVTVMENSNKKRGLANKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNTCKKEGQTRKGRQVYLGGYDMEQKAARAYDLAALKYWGPSTHINFPLENYQAELEEMKNMTRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGSNAVTNFDISRYDVERIMGSNTLLAGELARRNNKDTAIDPPRWEAIEYNTNVEAVQARNNNNDNTNNNNDVDSNWKMVSGGAFSVGIHDLIGIEGQQPLMEASSLVTSLSSSREASPEKIMGPSSMMFPKPLQLEPKMVLNNPLTSTGVVGSWFPSQMRPASLSHLPVFAAWNDT 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01257 565 Pfam AP2 domain 238 296 IPR001471 GO:0003700|GO:0006355
Arst8g01257 565 Pfam AP2 domain 340 390 IPR001471 GO:0003700|GO:0006355
Arst8g01257 565 SMART rav1_2 340 404 IPR001471 GO:0003700|GO:0006355
Arst8g01257 565 SMART rav1_2 238 310 IPR001471 GO:0003700|GO:0006355
Arst8g01257 565 ProSiteProfiles AP2/ERF domain profile. 238 304 IPR001471 GO:0003700|GO:0006355
Arst8g01257 565 PRINTS Ethylene responsive element binding protein signature 380 400 IPR001471 GO:0003700|GO:0006355
Arst8g01257 565 PRINTS Ethylene responsive element binding protein signature 239 250 IPR001471 GO:0003700|GO:0006355
Arst8g01257 565 ProSiteProfiles AP2/ERF domain profile. 340 398 IPR001471 GO:0003700|GO:0006355
Arst8g01257 565 CDD AP2 339 400 IPR001471 GO:0003700|GO:0006355
Arst8g01257 565 FunFam AP2-like ethylene-responsive transcription factor 339 400 - -
Arst8g01257 565 FunFam AP2-like ethylene-responsive transcription factor ANT 237 306 - -
Arst8g01257 565 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 83 437 - -
Arst8g01257 565 Gene3D AP2/ERF domain 340 400 IPR036955 GO:0003700|GO:0006355
Arst8g01257 565 Gene3D AP2/ERF domain 237 306 IPR036955 GO:0003700|GO:0006355
Arst8g01257 565 SUPERFAMILY DNA-binding domain 339 400 IPR016177 GO:0003677
Arst8g01257 565 CDD AP2 237 304 IPR001471 GO:0003700|GO:0006355
Arst8g01257 565 SUPERFAMILY DNA-binding domain 237 306 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01257 Arst-Chr8 17130088 17133342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01257 3 428 AP2-EREBP Transcription Factor Family AT4G37750 55.464 1.95e-161 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Arst8g01257 AP2 3.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01257 K09285 - gmx:100802454 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01257 8 17130088 17133342 Arst8g01257 8 17130088 17133342 ECH
Arst6g03967 6 107940062 107945061 Arst8g01257 8 17130088 17133342 PCT