Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03990 ATGGGCGAAATCTACAAAATCAACTCAATAGATTGGAGACCCTCTCCGGTAGTCGCTCTTGCCACCAGCGTCGACGGCCTCCGTGTAGCCGCAGCTCGCCAAGACGGTTCCCTTGAACTCTGGCTCGTATCTCCCGGCTCCATTGGCTGGCACTGTCAACTTACGATTCATGGTGACCCTACTACAAGAGTATCTTCGCTTCTTTGGTGCCCTGGCGGCTCCAATGGCATGCCGTGCGGTCGTTTGTTTTCGTCTAACATTGATGGTTCAGTTTCCAAGTGGGATCTTTTCCACCTGAAGCAAACGACTGTGCTTGATTCAGATGGTGTTTCCATTTGGCAAATGGCTGTTACGTTCCCTAAGGTTGATTTAGTTAATAATGTGCCTAATGGTGATGTTATGGGGAATGGTTATGCCAGTAAAATTCAAGAATCTGATGAACAAGAGAGCAGCGATAGTGACGAAGATAATGACTCACCTGATGCTGGCAAGCAATCTGTTCTTGAGTCTCCACGTGTAGCAATTGGTTATGATGATGGAAGTGTGAGGATTTATGCCATATCTGACGAAGATGAATTCCTATATGTAAAATCATTGCCTCGGGTCAAAGGACGAGTTTTAAGTGTGACTTGGAGCACTGATGCTAACTACATATACTCCGGAAGTAGTGATGGGTTAATACGGTGCTGGGATGCTACGTCTAGTCGTGAAATTTATAGGATTACGGCTGGGCTTGGAGGTTTGGGTGGCGGACATGAACTTTGCATATGGTCGTTACTGTCTTTAAGGTCTGGGACGCTTGTTAGTGCAGACAGCAGTGGCAGTGTCCAATTTTGGGATAGTAAACATGGAACTCTCTTGCAAGCACATTCATTGCACAAGGGCGATGTAAATGCTTTGGCTGCATCCCCAAGTCATGATAGGGTGTTCTCGGCTGGTTCTGATGGCCAGGTTATTCTCTATAAGCTGTCTAGCCAGTCAGCATCTTCCGACAGTGTCAACCCCCTTGTGATGACAAAGAAATGGATCTATGTTCACTATGTAAGGTCTCATACACATGATGTCAAGGCCTTGACTGTTGCTGTGCCGATATCTCAAGAAGATTCTCTGCCAGAAGAGAGGAATAAAAGACGTCGGCTTGAAGGAAAGCCTGTTGATTTAAATTATCATAAATGGTCCCAATTTGGGGTTCCCATGCTTATCTCAGCAGGAGATGACACAAAACTATTTGCATACCCGGTAAAGGAATTCACTAAGTTTTCTCCTCATGATATTTGTCCTGCGCCTCAGAGAACCCCGGTTCAGCTAGTGCTTAATACTGCCTTCAATCAATCATCAATGCTTTTAGTCCAGTCTAGGCAATGGTTAGATGTACATTTACTACATCTTGGAAATGTTCGTACAGCTGGATGCTTTACTAAGACTGAAATCCTTGCACGAGTGAAGACTAAGGAATCTCGGAAGATTGCTTGCAGCACAATTGCTAATTCTGGGGAGCATTTTGCGTACTCAGATAATGCAAGGCCTAGTCTGTTTGAGTTAAAGAGGAGTGAAGTTGGAAAGATTACATGGAGCGTGAGTAGAAAGAAGCTTCCCCCGAGGTTACCCTTTGCCCATTCAATGATTTTCACCCATGAGTCATCCTGGTTGATACTAGCTGGCCATGATAGGAGGATATATGTTGTGGATGTCAGCACATCGGAACTAGTGCATGCTTTTACACCCTGTCGGGAGCTGGATGACGAGAAATTGCCTCCGAAGGAACCTCCCATTACTAGATTATTTACCAGTTCCGACAGGCAGTGGCTGGCAGCTGTTAACTGCTTTGGCGATATATATGTGTTTAACTTGGAGACACTAAGGCAGCACTGGTTCATCTCAAGATTAGATGGTGCCTCTGTTACGGCTGGTGGGTTTCCTCCCCAGAACAACAATGTAATGATAGTTACAACTTCTTCGAATCAAGTGTATGCATTTGACGTTGAGGCCAAGCAGTTGGGAGAATGGTCGATGAGGAATACATACGTTCTTCCCCGGAGATTCCAGGAGTTTCCCGGTGAAGTCATTGGGCTTTCATTTCCTCCCTCATCAACTTCATCATCAGTTGTTATTTATAGCTCCAGGGCAATGTGCTTGATTGATTTTGGATTACCGGTGGAGCAAGACGAAAGCGATATGCTAAATGCTCAAGAATCATTGACCAGGAACTTGCAACAAAACTTTACTAATGTTAAGAAGAGGACAAAATATAGGAGAAACTTTGACGTATTTTCATTAGATAACCCAGTTTTATTTTTAGCTCATGTCTCAAAAAATTCCTTCTTTATGGTAGAAAAGCCATGGCTGGAAGTGGTTAAAAGACTAGAAGCCCCACCAGTTCATAAACATATTTTTGGCACCTAA 2403 0.4432 MGEIYKINSIDWRPSPVVALATSVDGLRVAAARQDGSLELWLVSPGSIGWHCQLTIHGDPTTRVSSLLWCPGGSNGMPCGRLFSSNIDGSVSKWDLFHLKQTTVLDSDGVSIWQMAVTFPKVDLVNNVPNGDVMGNGYASKIQESDEQESSDSDEDNDSPDAGKQSVLESPRVAIGYDDGSVRIYAISDEDEFLYVKSLPRVKGRVLSVTWSTDANYIYSGSSDGLIRCWDATSSREIYRITAGLGGLGGGHELCIWSLLSLRSGTLVSADSSGSVQFWDSKHGTLLQAHSLHKGDVNALAASPSHDRVFSAGSDGQVILYKLSSQSASSDSVNPLVMTKKWIYVHYVRSHTHDVKALTVAVPISQEDSLPEERNKRRRLEGKPVDLNYHKWSQFGVPMLISAGDDTKLFAYPVKEFTKFSPHDICPAPQRTPVQLVLNTAFNQSSMLLVQSRQWLDVHLLHLGNVRTAGCFTKTEILARVKTKESRKIACSTIANSGEHFAYSDNARPSLFELKRSEVGKITWSVSRKKLPPRLPFAHSMIFTHESSWLILAGHDRRIYVVDVSTSELVHAFTPCRELDDEKLPPKEPPITRLFTSSDRQWLAAVNCFGDIYVFNLETLRQHWFISRLDGASVTAGGFPPQNNNVMIVTTSSNQVYAFDVEAKQLGEWSMRNTYVLPRRFQEFPGEVIGLSFPPSSTSSSVVIYSSRAMCLIDFGLPVEQDESDMLNAQESLTRNLQQNFTNVKKRTKYRRNFDVFSLDNPVLFLAHVSKNSFFMVEKPWLEVVKRLEAPPVHKHIFGT 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03990 800 ProSiteProfiles Trp-Asp (WD) repeats profile. 290 331 IPR001680 GO:0005515
Arst6g03990 800 MobiDBLite consensus disorder prediction 143 165 - -
Arst6g03990 800 ProSiteProfiles Trp-Asp (WD) repeats profile. 199 240 IPR001680 GO:0005515
Arst6g03990 800 Gene3D - 127 431 IPR015943 GO:0005515
Arst6g03990 800 Gene3D - 521 716 IPR015943 GO:0005515
Arst6g03990 800 SUPERFAMILY WD40 repeat-like 7 326 IPR036322 GO:0005515
Arst6g03990 800 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 800 IPR044622 GO:0010073|GO:0035266
Arst6g03990 800 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 800 IPR044622 GO:0010073|GO:0035266
Arst6g03990 800 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 199 236 - -
Arst6g03990 800 SMART WD40_4 283 322 IPR001680 GO:0005515
Arst6g03990 800 SMART WD40_4 192 231 IPR001680 GO:0005515
Arst6g03990 800 SMART WD40_4 528 563 IPR001680 GO:0005515
Arst6g03990 800 SMART WD40_4 49 95 IPR001680 GO:0005515
Arst6g03990 800 SMART WD40_4 3 42 IPR001680 GO:0005515
Arst6g03990 800 SMART WD40_4 234 280 IPR001680 GO:0005515
Arst6g03990 800 Pfam WD domain, G-beta repeat 206 231 IPR001680 GO:0005515
Arst6g03990 800 Pfam WD domain, G-beta repeat 293 321 IPR001680 GO:0005515
Arst6g03990 800 SUPERFAMILY WD40 repeat-like 251 690 IPR036322 GO:0005515
Arst6g03990 800 Gene3D - 5 126 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03990 Arst-Chr6 108194477 108199823 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03990 K14548 - gmx:100797494 1147.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03990 6 108194477 108199823 Arst6g03990 6 108194477 108199823 ECH