Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03973 ATGGCCAATAATTCTCAGCCCCCTAGTATGCAGTTTCGGCCAGTCATTCAGGCCCAGCAAGGTCAGCCATTTGCTCCAATGGCTTCCCAACAATTTGGACTTGCAGGACATGCTATTCCTTCTTCAAATGTTGCAATGCCTGTTGGTCAGAGTCAGCAATTACAGTATTCACAACCAATGCAGCAGTTGCCTCCAAGACATATTCAGCCTGGTCAACCTGCACCTTCGTCGCAGGTTATACCTATGCAATATATCCAAACAAATAGGCCCCCGACATCCGTCCCACCACATTCACAGCCAACTGTTCCCCACTTAAGCAGTCATATGCCCAGCTTGGCTGTTTCAGCAGCAACTTCTCATTCTTCATATACTTTTCAACCACCGTATAGTCAGCAGCAGGATAATGTTAATGCAATGGCTCAGTACCAGCCATCAGGCCAAATGCATGCTCCTCCGGCTGGACAACCTTGGGTGTCCTCTGTTTCTCAGAGTGCTGCAACTGTTACACCAGTGCAACAGGCTGGAGTGCAATCATCTGGTACTCCGTCAACTGATTCTGCAACAAGTGCCCCTAACCAGCAGTCAGCATCTGATTGGCAAGAGCATACTGCAGCTGATGGCAGAAGATATTACTACAACAAGAGGACAAGGCAATCTAGTTGGGAGAAACCATTGGAACTGATGTCACCTATTGAGAGGGCTGATGCATCAACTGTTTGGAAAGAATTCACATCTTCAGATGGAAGAAAGTATTATTACAACAAGGTTACTCAGCAATCAACATGGTCAATACCAGAGGAACTTAAGTTGGCTCGTGAATTGGCACTGAAAGCTGCCAACCAGGGAATGCAATTAGAAACAAGTGATACATCCAATACTGCTGTTTCATCTGCTGCACCATCAACAGTGACTAATACTGCTAGCTCAAACACTCCTTTGACATCAAATGGGCTTGCTTCAAGTCCAGCTTCTGTCACACCAATTGCATCATCAACTGGTCCTCAGCAGTTGGTTTCTGGATTATCAAGTACCACTGGGACTGAACTGAGTACTGTGGTAACTGCGTCTACGGCAGTAGCTGGACCTGCAAATCCTCTTGACACCACTACACCGTCTAGTGTTGAAAATCAAGCATCTCAGGATTTTGCTGCATCTACCGGTGGAGCTTCTGTTCAAGATATAGAGGAAACCAAAAAAGGAGTGCCAGTTGCTGGAAAAGCTAATGTGACTCTGCCGGAGGAGAAAGCAAATGATAAAGAAACCTTTGCATATGCAAATAAGATGGAAGCAAAAATTGCATTTAAGGCACTATTGGAGTCTGCTAATGTTCAGTCTGATTGGACATGGGAACAGGCGATGAGAGAAATAATCAATGACAAAAGATACAATGCTCTAAAAACACTTGGTGAGCGGAAACAAGCTTTTAATGAGTATTTGGGCCAAAGGAAGAAGCTAGAGGCTGAAGAGAGACGCATGAAGCAGAAAAAAGCTCGAGAAGAATTCACAAAGATGTTGGAAGAGTGCAAGGAGCTAACTTCATCCATGAGATGGAGCAAAGCAATCAATATGTTTGAAAATTTATTTGAGAGCTACATGGTGGAACTCGAGAGAAAGGAAAAGGAAAATGCTGCTGAGGAACACAGGCGGAATTTAGCAGAATACAGGAAATTCTTGGAGTCATGTGATTATGTGAAGGTTCACAGTCCATGGCGAAAAGTCCAAGATCGGTTAGAGGACGATGATAGATATTTACGGCTTGAAAAAATTGACCGCTTGCTTGTTTTCCAGGACTATATTCGTGAATTGGAAAAGGAAGAAGAGGAGCAAAAACGAGTACAGAAGGAGCGAGTTCGTCGTGGTGAAAGGAAAAATCGTGATGCATTCCGCAAGTTGTTGGAAGAACATGTTGCTGCTGGAATTCTTAATGCTAAAACTCAATGGAGAGAATACTGCTTGAAGGTTAGGGATTTTCCTCAATATCAAGCTGTCGCATCGAACACATCTGGTTCCACTCCTAAGGATTTGTTTGAGGATGTAGTAGAAGATCTTGAAAATCAGTACCATGAAGACAAGACACTGATAAAAGATATAATTAAGTCAGGCAAGATCACTGTAGTGTCCACTTCGGTGTTTGAGGAATTCAAGGCTGCTATCTTGGAAGAAGCTAGTTGCGAAACAATATCAGAGATCAATTTGAAGCTTATATTCGAAGACTTGTTAGAGAGAGCTAAAGAGAAAGAGGAGAAAGAAGCTAAGAAGCGCCAGCGCCTTGCTGATGACTTAACTAACCTGTTATATACATTCAAGGATATTACTACATCTTCAACTTGGGAGGATTGCAAGCCACTTGTTGAGGAGACACAAGAGTACAGATCAATGGGGGATGAAAACTACAGTAGAGAAGTATTTGAGGAGTACATTACATACCTAAAGGAAAAAGCTAAAGAGAAGGAACGCAAGCGTGAAGAGGAAAAGGCCAGAAAGGAGAAAGAGAGAGAAGAGAAAGAGAAACGGAAGGAGAAAGAAAAGGAAAAAAAAGAGAAGGATAGAGAACGCGAGAAAGAAAAGTCTAAAGATCGGCATAAGAAGGACGACACAGATAGTGAAAACCAAGATATTGAAAGCCATGGTTTCAAGGAAGAGAAGAAAAAAGACAAAGATAAGGAAAGGAAACACAGGAAGAGGCGACACAGCAGTGTAGAGGATGTGGATTCCGAGAGGGATGAAAAAGAAGAGTCTAAGAAATCACGAAAGCACGGCAGCGACCGAAAGAAATCTCGAAAGCATGCAAACTCTCCAGAATCAGACAATGAAACCCGGCATAGAAGACACAAGAGGGAGCACCGTGATGGTTCCCGGAAAACCGGGGGCCATGAAGAACTTGAAGACGGGGAACTCGGTGATGATGCAGAGATTTAG 2919 0.4341 MANNSQPPSMQFRPVIQAQQGQPFAPMASQQFGLAGHAIPSSNVAMPVGQSQQLQYSQPMQQLPPRHIQPGQPAPSSQVIPMQYIQTNRPPTSVPPHSQPTVPHLSSHMPSLAVSAATSHSSYTFQPPYSQQQDNVNAMAQYQPSGQMHAPPAGQPWVSSVSQSAATVTPVQQAGVQSSGTPSTDSATSAPNQQSASDWQEHTAADGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSSDGRKYYYNKVTQQSTWSIPEELKLARELALKAANQGMQLETSDTSNTAVSSAAPSTVTNTASSNTPLTSNGLASSPASVTPIASSTGPQQLVSGLSSTTGTELSTVVTASTAVAGPANPLDTTTPSSVENQASQDFAASTGGASVQDIEETKKGVPVAGKANVTLPEEKANDKETFAYANKMEAKIAFKALLESANVQSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKKAREEFTKMLEECKELTSSMRWSKAINMFENDERFNAVDKMRDREDLFESYMVELERKEKENAAEEHRRNLAEYRKFLESCDYVKVHSPWRKVQDRLEDDDRYLRLEKIDRLLVFQDYIRELEKEEEEQKRVQKERVRRGERKNRDAFRKLLEEHVAAGILNAKTQWREYCLKVRDFPQYQAVASNTSGSTPKDLFEDVVEDLENQYHEDKTLIKDIIKSGKITVVSTSVFEEFKAAILEEASCETISEINLKLIFEDLLERAKEKEEKEAKKRQRLADDLTNLLYTFKDITTSSTWEDCKPLVEETQEYRSMGDENYSREVFEEYITYLKEKAKEKERKREEEKARKEKEREEKEKRKEKEKEKKEKDREREKEKSKDRHKKDDTDSENQDIESHGFKEEKKKDKDKERKHRKRRHSSVEDVDSERDEKEESKKSRKHGSDRKKSRKHANSPESDNETRHRRHKREHRDGSRKTGGHEELEDGELGDDAEI 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03973 987 CDD WW 240 267 IPR001202 GO:0005515
Arst6g03973 987 ProSiteProfiles FF domain profile. 494 549 IPR002713 -
Arst6g03973 987 MobiDBLite consensus disorder prediction 942 958 - -
Arst6g03973 987 FunFam Pre-mRNA-processing protein 40A 627 708 - -
Arst6g03973 987 Coils Coil 543 572 - -
Arst6g03973 987 Coils Coil 475 498 - -
Arst6g03973 987 SUPERFAMILY WW domain 227 268 IPR036020 GO:0005515
Arst6g03973 987 ProSiteProfiles FF domain profile. 634 697 IPR002713 -
Arst6g03973 987 SUPERFAMILY WW domain 198 232 IPR036020 GO:0005515
Arst6g03973 987 Gene3D FF domain 427 482 IPR036517 -
Arst6g03973 987 Coils Coil 822 873 - -
Arst6g03973 987 FunFam pre-mRNA-processing protein 40A isoform X1 426 481 - -
Arst6g03973 987 SMART FF_2 769 824 IPR002713 -
Arst6g03973 987 SMART FF_2 636 697 IPR002713 -
Arst6g03973 987 SMART FF_2 494 549 IPR002713 -
Arst6g03973 987 SMART FF_2 427 481 IPR002713 -
Arst6g03973 987 SMART FF_2 562 616 IPR002713 -
Arst6g03973 987 SUPERFAMILY FF domain 419 481 IPR036517 -
Arst6g03973 987 ProSitePatterns WW/rsp5/WWP domain signature. 240 265 IPR001202 GO:0005515
Arst6g03973 987 MobiDBLite consensus disorder prediction 144 202 - -
Arst6g03973 987 SUPERFAMILY FF domain 629 704 IPR036517 -
Arst6g03973 987 MobiDBLite consensus disorder prediction 832 987 - -
Arst6g03973 987 FunFam Pre-mRNA-processing protein 40A 763 836 - -
Arst6g03973 987 ProSiteProfiles WW/rsp5/WWP domain profile. 234 267 IPR001202 GO:0005515
Arst6g03973 987 ProSiteProfiles FF domain profile. 427 481 IPR002713 -
Arst6g03973 987 Pfam WW domain 240 265 IPR001202 GO:0005515
Arst6g03973 987 Pfam WW domain 197 224 IPR001202 GO:0005515
Arst6g03973 987 FunFam Pre-mRNA-processing protein 40A 557 625 - -
Arst6g03973 987 Coils Coil 751 779 - -
Arst6g03973 987 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 193 771 IPR039726 GO:0045292
Arst6g03973 987 MobiDBLite consensus disorder prediction 911 933 - -
Arst6g03973 987 FunFam Pre-mRNA-processing protein 40A 483 556 - -
Arst6g03973 987 MobiDBLite consensus disorder prediction 832 902 - -
Arst6g03973 987 SUPERFAMILY FF domain 554 623 IPR036517 -
Arst6g03973 987 Gene3D FF domain 558 626 IPR036517 -
Arst6g03973 987 Gene3D FF domain 627 708 IPR036517 -
Arst6g03973 987 Gene3D FF domain 483 557 IPR036517 -
Arst6g03973 987 ProSiteProfiles WW/rsp5/WWP domain profile. 193 226 IPR001202 GO:0005515
Arst6g03973 987 MobiDBLite consensus disorder prediction 285 343 - -
Arst6g03973 987 SUPERFAMILY FF domain 770 831 IPR036517 -
Arst6g03973 987 MobiDBLite consensus disorder prediction 156 201 - -
Arst6g03973 987 CDD WW 197 226 IPR001202 GO:0005515
Arst6g03973 987 Gene3D FF domain 764 837 IPR036517 -
Arst6g03973 987 Gene3D - 192 235 - -
Arst6g03973 987 Gene3D - 236 277 - -
Arst6g03973 987 SUPERFAMILY FF domain 488 556 IPR036517 -
Arst6g03973 987 Coils Coil 610 630 - -
Arst6g03973 987 ProSiteProfiles FF domain profile. 562 616 IPR002713 -
Arst6g03973 987 SMART ww_5 194 226 IPR001202 GO:0005515
Arst6g03973 987 SMART ww_5 235 267 IPR001202 GO:0005515
Arst6g03973 987 ProSitePatterns WW/rsp5/WWP domain signature. 199 224 IPR001202 GO:0005515
Arst6g03973 987 Pfam FF domain 565 613 IPR002713 -
Arst6g03973 987 Pfam FF domain 496 546 IPR002713 -
Arst6g03973 987 Pfam FF domain 429 478 IPR002713 -
Arst6g03973 987 Pfam FF domain 638 693 IPR002713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03973 Arst-Chr6 108033924 108043230 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03973 K12821 - gmx:100806019 1333.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03973 6 108033924 108043230 Arst6g03973 6 108033924 108043230 ECH