Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03971 ATGGATCTTGGTGTGGTGGGTTTTGATGGGTTGGTGGGTTCAGAAGCTGGGTTTGTTCCATTTGGATCTGGGTTCCTTAAGCATCAAAGATCTGAAGAGGAGGTGAGTAATAATGATCATAATAATAGAAGAGGGGCAAAACTGTCAAAGGTTAATATTACTAGTGGTGATGATGATGATGATGTCATCACAACAACAACATCAAAAGGAATGTTGTTTTTTCAGAATCATCAGAGGAACAACAACAACAATAGCTCTTGTTGTAATGTGTTGTTGAGATCTAATAATAATAATAATAATGGAAATGACAATGTTGCCATTGCTCTCTTCAAACAAGAAGGAGAAGAGAAGATGCTGAGTTTCTCAACAACACCAACACCAAAGTCAGAGACTTTGATTGTGGAAAAGGCTTCCTCAAATGCTACATTGCACACTTCTTATCACCCTTTCTCTAGTTACAACATAAATAATAATGCAGGTTACAATAACAGTAATTGGGGAATGATGATGATGGGAAATAGTAGTAGTAATAATAATGTGGGAAGAGTGGTAGGAGGTGCATTATTCACTCCCTCACAGTGGATGGAGCTGGAGCACCAAGCACTCATTTACAAGTATATCACTGCAAATGTTCCTGTTCCTTCTCATCTTCTTATTCCAATCACTAAAGCCCTTCATTCCACTTCTCCATTCTCTAACTTTCCTAATCCACTTCTTAGACCCAATCCTTTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAGCAGCACCGATCCGGAGCCGGGTCGGTGCAGGAGAACCGATGGGAAGAAATGGCGGTGCTCGAGGGACGCAGTTGTGGACCAGAAGTACTGCGAGCGTCACATGAACCGAGGCCGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCTGCTGCCGTCACCACCACCACCACCACCACAACCACCACTTCTAACTCAAAGCTATTGTTGCCTAACAGCAACAATTCAAGTTCTTCATTCTCCATTGTGGGGAACACTGCTTCCAACAACAACAGCAACACTATTTCATTTGGAAACTGCCATGAACACAAGAATGTTATTCAGCAGCAGCAGCCTGTTGCATCTGATGCTTCTGCTGCCAATAATATCAGCAGGATGTTTATGAAGAAAGAGAACAATAATGCAAATGAGAGTTGTTCACTACTTCCAATGCTACCACCAAAGGAAAACCCATTCATGATTCATAACAACCACCATGAATTTGGAGTTGTGACTTGTGATTCACTCCTTAACCCTTCTTCCAATAATAAGAGCAATGATTCACAAAACAATTCCCTAAGGCATTTCATTGATGAGTCAACACAGTTGTCAATCTCAATCCCAAATCATCAATTCATGCCAACCAATGAGAAAGTGACACTCTCACCTTTAAGGGTATCATCATCAAGGGAGTTGGAATTGGAATTAGTAGACCCTATTCAAATGGGGTTAGGAGTTGGAATTGGTGTCAACAACAACAACAACAACAACATTGTTAGACAACCAAATTGGATTCCAATTTCATGGGAGAGTTCAATGGGTGGTCCACTTGGTGAGGTTCTCAACCTTAATAATAATAATAATAATAATAATAATAATAATAACAATAATAAGGGATCTTTGAACCTTATTAGTAGTGATGGTTGGGATAATAGTCCTTCAATAGGGTCATCACCAACTGGAGTGTTGCAAAAGACAACAGCATTTGGTTCACTCTCTAATAGCAGTGCTGGGAGTAGTCCAAGGGCAGCAGACAACAACAAAGGAGGGGCAATCTTGTAA 1812 0.4111 MDLGVVGFDGLVGSEAGFVPFGSGFLKHQRSEEEVSNNDHNNRRGAKLSKVNITSGDDDDDVITTTTSKGMLFFQNHQRNNNNNSSCCNVLLRSNNNNNNGNDNVAIALFKQEGEEKMLSFSTTPTPKSETLIVEKASSNATLHTSYHPFSSYNINNNAGYNNSNWGMMMMGNSSSNNNVGRVVGGALFTPSQWMELEHQALIYKYITANVPVPSHLLIPITKALHSTSPFSNFPNPLLRPNPLGWGGFHLGFSSSTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHAAAVTTTTTTTTTTSNSKLLLPNSNNSSSSFSIVGNTASNNNSNTISFGNCHEHKNVIQQQQPVASDASAANNISRMFMKKENNNANESCSLLPMLPPKENPFMIHNNHHEFGVVTCDSLLNPSSNNKSNDSQNNSLRHFIDESTQLSISIPNHQFMPTNEKVTLSPLRVSSSRELELELVDPIQMGLGVGIGVNNNNNNNIVRQPNWIPISWESSMGGPLGEVLNLNNNNNNNNNNNNNNKGSLNLISSDGWDNSPSIGSSPTGVLQKTTAFGSLSNSSAGSSPRAADNNKGGAIL 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03971 603 ProSiteProfiles WRC domain profile. 258 302 IPR014977 -
Arst6g03971 603 PANTHER GROWTH-REGULATING FACTOR 5 139 460 IPR031137 GO:0005634|GO:0006351|GO:0032502
Arst6g03971 603 SMART QLQ_2 187 223 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst6g03971 603 MobiDBLite consensus disorder prediction 30 52 - -
Arst6g03971 603 ProSiteProfiles QLQ domain profile. 188 223 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst6g03971 603 MobiDBLite consensus disorder prediction 286 332 - -
Arst6g03971 603 Pfam QLQ 189 221 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst6g03971 603 MobiDBLite consensus disorder prediction 580 603 - -
Arst6g03971 603 MobiDBLite consensus disorder prediction 535 555 - -
Arst6g03971 603 Pfam WRC 259 301 IPR014977 -
Arst6g03971 603 MobiDBLite consensus disorder prediction 30 46 - -
Arst6g03971 603 MobiDBLite consensus disorder prediction 306 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03971 Arst-Chr6 108015254 108020007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03971 1 597 GRF Transcription Factor Family AT2G22840 37.066 1.94e-76 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Arst6g03971 WRC 5.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03971 - - aip:107605578 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03971 6 108015254 108020007 Arst6g03971 6 108015254 108020007 ECH