Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03959 ATGGCGGATCCGTATGTCCTAGGCTGGATCCTTGTCTCTGTTCTCAGCGTCTTCGCGCTCTACAGCTTAGTTTTCGCCGGAGGAAACCGCCGCCGTCGTGCTTCGCAGGAGAACGATGCTCAGCGTACGGGGAACGTGAAAACTTCCGTCAGAGAATGTGGATCCAAGAACCTCGATGGCAACGATGCTGACGTTATCGTCGTCGGAGCTGGCGTTGCTGGCGCGGCTCTTGCTTACACACTCGGCAAGGATGGACGGCGAGTACTTGTAGTTGAAAGAGATTTGAGTGAGCCTGACAGAATTGTTGGAGAGTTGCTACAACCTGGCGGCTATCTCAAATTGATTGAGCTGGGACTTGAAGATTGTGTGGAGGAAATCGATGCTCAGAGAGTGTTTGGTTATGCACTTTTCAAGGACGGAAAAAATACATGCCTCTCTTATCCCTTGGAAAAGTTTCAGTCAGATATCGCTGGTAGAAGCTTTCACAATGGCCGTTTTATTCAGAGGATGCGCGAAAAGGCTGCCACACTGCCCAATGTCCGGTTGCTGCAAGGGTCAGTCACTTCCTTGATTGAAGAAAAGGGGACAATTAAAGGTGTTCAGTACAAGACCAAAGATGGTCAGGAGCTGAAAGTACATGCACCTCTTACTGTTGTTTGTGATGGCGGCTTCTCAAACTTGCGCCGTTGTCTTTGTAATCCTAAGGTTGATATTCCCTCTCACTTCGTTGGCTTAATTCTGGAGAATTGCCAACTTCCATATGAAAATCATGGTCACGTCATACTCGGAGACCCTTCCCCAATTCTGTTCTATCGCATAAGTAGTACAGAGGTTCGTTGTTTGGTTGATGTACCTGGGCAGAAAGTTCCTTCTATCGCAAATGGTGAAATGGAGAAGTATTTGAAGACAATGGTGGCTCCACAGATCCCCGCTGAGCTCCATGATGCCTTTTTAGCTGCAGTTGAGAAAGGCAACATAAGGTCAATATCGAATAGAAGCATGCCAGCAGACCCCCTTCCTACCCCTGGAGCCATTTTGATGGGAGATGCCTTCAACATGAGGCATCCTCTAACAGGGGGTGGAATGACCGTGGCATTGTCAGACATTGTGGTGCTGAGAAATCTTCTCAGGCCCCTGAGTGACCTGAATGACGCACCCACACTCTGCAAATACCTTGAATCCTTTTACACCTTGAGAAAGCCTGTGGCATCAACCATAAATACATTAGCAGGTGCCTTGTACAAGGTCTTCTCTGCATCTCCAGATCAAGCAAGGAAGGAAATGCGCCAAGCTTGCTTTGATTATCTGAGCCTTGGAGGCCTATGTTCCCAGGGACCAATCTCATTACTCTCAGGACTAAACCCTCGTCCTTTGAGCTTGGTGGCTCATTTCTTTGCTGTTGCAGTGTATGGTGTTGGCCGCTTAATATTTCCCTTTCCCTCGCCCAAGAAGATATGGATTGGAGCTCGGTTAATCTCTAGTGCATCTGGAATCATCTTTCCTATAATTAAGGCAGAAGGAGTTCGCCAAATGTTCTTCCCTGCAACTGTTCCAGCTTATTACAGAGCTCCTCCTGCTGCAAGATAG 1587 0.4795 MADPYVLGWILVSVLSVFALYSLVFAGGNRRRRASQENDAQRTGNVKTSVRECGSKNLDGNDADVIVVGAGVAGAALAYTLGKDGRRVLVVERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEEIDAQRVFGYALFKDGKNTCLSYPLEKFQSDIAGRSFHNGRFIQRMREKAATLPNVRLLQGSVTSLIEEKGTIKGVQYKTKDGQELKVHAPLTVVCDGGFSNLRRCLCNPKVDIPSHFVGLILENCQLPYENHGHVILGDPSPILFYRISSTEVRCLVDVPGQKVPSIANGEMEKYLKTMVAPQIPAELHDAFLAAVEKGNIRSISNRSMPADPLPTPGAILMGDAFNMRHPLTGGGMTVALSDIVVLRNLLRPLSDLNDAPTLCKYLESFYTLRKPVASTINTLAGALYKVFSASPDQARKEMRQACFDYLSLGGLCSQGPISLLSGLNPRPLSLVAHFFAVAVYGVGRLIFPFPSPKKIWIGARLISSASGIIFPIIKAEGVRQMFFPATVPAYYRAPPAAR 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03959 528 Pfam NAD(P)-binding Rossmann-like domain 67 93 - -
Arst6g03959 528 Pfam Squalene epoxidase 213 486 IPR013698 GO:0004506|GO:0016020|GO:0050660
Arst6g03959 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 341 356 - -
Arst6g03959 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 213 228 - -
Arst6g03959 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 64 86 - -
Arst6g03959 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 356 372 - -
Arst6g03959 528 Gene3D - 56 435 IPR036188 -
Arst6g03959 528 FunFam Squalene monooxygenase 2 57 437 - -
Arst6g03959 528 SUPERFAMILY FAD/NAD(P)-binding domain 63 437 IPR036188 -
Arst6g03959 528 PANTHER SQUALENE MONOOXYGENASE 14 525 IPR040125 GO:0004506|GO:0016126
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03959 Arst-Chr6 107862642 107867563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03959 45 526 Miscellaneous Gene Families AT1G58440 77.433 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03959 K00511 - gmx:100804406 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03959 6 107862642 107867563 Arst6g03959 6 107862642 107867563 ECH