Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03938 ATGGAGTCCCTTCTAAGGATCACCCTTCTCTTCTTTGCCTTCACTACTTTCGTTGCGTCCGCCTCCGGCCGCCGCGACATAGTCGGAGGTACTCTCCGGCTGCCCTCTGAGGCCATCTCCAGATTCTTCCATGAGCCAGAGAATGAAGGGACAAAGTGGGCTGTTCTTCTTGCTGGTTCCAATGGTTATTGGAACTATAGGCATCAGGCTGATATTTGTCACGCATATCAACTATTGAGGAGTGGAGGGGTAAAAGAAGAAAACATAATTGTGTTTATGTATGATGACATAGCTTATAGTGAAGAAAACCCAAGGCCTGGAGTCATAATTAACAAACCAGATGGGGGAGATGTTTATAAAGGTGTTCCTAAGGATTACACCGGCAAAGATGTTAATGTCAACAACTTCTTTGCTGCTCTTCTTGGAAACAAATCAGCTCTCACTGGTGGCAGTGGCAAAGTTGTAGATAGTGGCCCCAATGATCACATATTTGTGTTTTACAGTGACCATGGAGGTCCAGGGATTCTTGGTATGCCTGTTGGTCCTTACTTGTATGCAAATGATCTTAATGAAGTCTTGAAGAAGAAGCATGCTTCTGGAGGATACAAAAGCCTTGTGTTTTATCTAGAGGCATGTGAATCTGGGAGTATCTTTGAAGGCCTTCTTCCTGAAGACATAAATATTTACGCGACAACGGCTTCAAACGCGGTCGAGAGCAGTTGGGGAACATATTGCCCTGGGGAGGATCCTAGTCCTCCCCCAGAATACTCAACCTGCTTGGGTGACCTCTACAGTATTTCTTGGATGGAAGACAGTGACACCCACAATTTGAGGACAGAAACTTTACACCAACAATATAAATTGGTCAAAGATAGGACTTTGAATGGAAACGCATACTATGGCTCTCATGTGATGCAATATGGTGACGTAGGGATCAGCGAGAACCTTCTTTTCCAATATTTGGGAACAAATCCTGCCAATGATAATTACACTTTTGTGGATGAAAATTCCTTGAGGACACCTTCAAAAGCAGTGAACCAACGCGATGCGGACCTCATTCATTTCTGGGAGAAGTTCCGCAAAGCGCCCGAGGGTTCTTCGAGTAAGATCACGGCACAGAAACAAGTTGTGGAAGTGATGTCTCACAGAATGCACATAGACAACAGTGTGAAACTCATTGGAAATCTCTTATTTGGCACTGAAAAGGGTCCTGAATTGCTAAGTGCAGTTAGACCTGCAGGGAAGCCTCTTGTTGATGACTGGGATTGCCTCAAAAACATGGTAAGGACTTTTGAGACACATTGTGGATCCTTATCTCAATATGGAATGAAACATATGAGAACCTTTGCAAACATCTGCAATGCTGGGATCCATAAAGATCAAATGGATGAGGCCACAGCACAAGCATGTGTTAGCATCCCTTCCAATCCATGGAGTTCTCTTGAGAGGGGTTTTAGTGCATAA 1464 0.4426 MESLLRITLLFFAFTTFVASASGRRDIVGGTLRLPSEAISRFFHEPENEGTKWAVLLAGSNGYWNYRHQADICHAYQLLRSGGVKEENIIVFMYDDIAYSEENPRPGVIINKPDGGDVYKGVPKDYTGKDVNVNNFFAALLGNKSALTGGSGKVVDSGPNDHIFVFYSDHGGPGILGMPVGPYLYANDLNEVLKKKHASGGYKSLVFYLEACESGSIFEGLLPEDINIYATTASNAVESSWGTYCPGEDPSPPPEYSTCLGDLYSISWMEDSDTHNLRTETLHQQYKLVKDRTLNGNAYYGSHVMQYGDVGISENLLFQYLGTNPANDNYTFVDENSLRTPSKAVNQRDADLIHFWEKFRKAPEGSSSKITAQKQVVEVMSHRMHIDNSVKLIGNLLFGTEKGPELLSAVRPAGKPLVDDWDCLKNMVRTFETHCGSLSQYGMKHMRTFANICNAGIHKDQMDEATAQACVSIPSNPWSSLERGFSA 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03938 487 PIRSF Legumain 3 487 IPR001096 GO:0006508|GO:0008233
Arst6g03938 487 CDD legumain_C 349 470 - -
Arst6g03938 487 Gene3D - 50 346 - -
Arst6g03938 487 FunFam Vacuolar-processing enzyme beta-isozyme 347 475 - -
Arst6g03938 487 Gene3D - 347 475 IPR046427 -
Arst6g03938 487 Pfam Peptidase C13 family 52 322 IPR001096 GO:0006508|GO:0008233
Arst6g03938 487 PIRSF AE 2 487 IPR043577 GO:0004197|GO:0051603
Arst6g03938 487 FunFam Vacuolar-processing enzyme beta-isozyme 50 346 - -
Arst6g03938 487 PANTHER HEMOGLOBINASE FAMILY MEMBER 27 472 IPR001096 GO:0006508|GO:0008233
Arst6g03938 487 PRINTS Hemoglobinase (C13) cysteine protease signature 53 77 IPR001096 GO:0006508|GO:0008233
Arst6g03938 487 PRINTS Hemoglobinase (C13) cysteine protease signature 153 172 IPR001096 GO:0006508|GO:0008233
Arst6g03938 487 PRINTS Hemoglobinase (C13) cysteine protease signature 125 140 IPR001096 GO:0006508|GO:0008233
Arst6g03938 487 PRINTS Hemoglobinase (C13) cysteine protease signature 78 107 IPR001096 GO:0006508|GO:0008233
Arst6g03938 487 PRINTS Hemoglobinase (C13) cysteine protease signature 202 218 IPR001096 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03938 Arst-Chr6 107617791 107623554 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03938 K01369 - gmx:547700 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03938 6 107617791 107623554 Arst6g03938 6 107617791 107623554 ECH