LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr9g0360	ATGATTCCAAAGCGTGGAAGAATCTACCAAACACCCAAACACCATATTATTATCTATCAGTTCTTCATTTCTCACTCAATAATAATAGTTTCTAAAAAAATGGCGAATAATGAAAAAAATGAGCTTAGAGAAAAGGATGGAAGTTGTTCATTCATGGATTTCCCGGACGACGTTCTGGTCTGCATCCTCTCGTTCCTGGGCCCAACCGAGATCGCCACTTTCGGGTGCACATCGAAACGCTTCGTTTCACTCTGCGGCAGCGACTCGAGGGTGTGGTTCAGTATGTGCGAGCGCAGGTGGGGTTCGAAGACCAGCATCGCGAAATGGGGCAAGGGCAAAATCTCCTACAGGATCCTCTACAATACCCTTCACGATTGGGAGAACCTTCTCGGCTTCTGGCGCCGAAGCGGTGACGGAACCCCTTCCTTGCTCTTCTTCGAGTGGGGCCCATCGTTTCTCGCAGCTTCTAGGGTTTCTCCCTCCAAATCTGGAGCCTATGACGTCACCAAAGCGCCGTTTCTCTGGATGACTCTCTCCCAGGAGGGACATGTCGTCTGTTTTCTCGATCCTCACGGTAGGGTTGACTTTTCGCCCAATGTTGACCTCGGATTTTCTGAGGTTCAGGCTTTGTTGGTTCCGGTGAGTGTTAGTTTCATGGGGAAGACGCACGTTGTGGTGGAGGAGAGCGCGTTTAGGAGGAGTTCCAGCTCCGTGAATCTTTGTGGCGGAGAGGATTGTGGTGGAGAGGATGGGGTCGGTGGTGGGGAGAGTGGATCGCCGGGGAGCTTGCCGGACCGGTTGATGTCGGAAATTTATCAGCATTTTGCGAACCGGACGAGTCCCGGCAGCGATAAGTCGAGGAGGCAGAGGAGGAGGGAGAAGGAGAGGTTGGCTAGGAGGAAATGGGAGACTCAGCATTTTGTGAAGATTGTGAATTGCTCTCCCACGCCATCACGGCCTTTGCAGGGCCTGTGGAAGATGAGTGATGGTGGAGCTCTTCAAGTGGTGGTACGAATGAATAGCATTTTGAGCTCTCTACTATCATTGTTGCAGGGAATTTGTGATGACATGAGTTTAGCCTTTTACCTTGTGGCATATGATGACATTGGGGGCATTGCCTGCCGCCGGATTGGGGATCATCCGGAACATTTTTCCAGTTATGGACCAGTTTTCTGGACATCTGATACTACATTTCTGGAATCACCCTTCTCTCTAGAGGAAGAATCTTTGTATGACAGTCGTATTCATCTTCGACCACTTCAACCACCAGATAATGACATACACGAGCAGTTCTCTTTGTCAGATGATGAAGTGGTAGATCGAATTCAGCAGTTCCATTTATCAGACAATGAAGTGGTAAACCGAATTCTTCACATAAGCTCAAGTTATGATTTATTTAGCCCAGAACTTGCTGGAACAATAAATCCAAGGAGTGCGGAGGGAAGGATTTGGCAGTACCAGAATGGTACTTTTGGATTTGGATTCCTTCGGGACAATTTTGTTATAGACATGAAACATATTGTCGACAATGGTTGTCTGGTGGATACAGTAAATACTTCTGCTGATTGA	1569	0.4812	MIPKRGRIYQTPKHHIIIYQFFISHSIIIVSKKMANNEKNELREKDGSCSFMDFPDDVLVCILSFLGPTEIATFGCTSKRFVSLCGSDSRVWFSMCERRWGSKTSIAKWGKGKISYRILYNTLHDWENLLGFWRRSGDGTPSLLFFEWGPSFLAASRVSPSKSGAYDVTKAPFLWMTLSQEGHVVCFLDPHGRVDFSPNVDLGFSEVQALLVPVSVSFMGKTHVVVEESAFRRSSSSVNLCGGEDCGGEDGVGGGESGSPGSLPDRLMSEIYQHFANRTSPGSDKSRRQRRREKERLARRKWETQHFVKIVNCSPTPSRPLQGLWKMSDGGALQVVVRMNSILSSLLSLLQGICDDMSLAFYLVAYDDIGGIACRRIGDHPEHFSSYGPVFWTSDTTFLESPFSLEEESLYDSRIHLRPLQPPDNDIHEQFSLSDDEVVDRIQQFHLSDNEVVNRILHISSSYDLFSPELAGTINPRSAEGRIWQYQNGTFGFGFLRDNFVIDMKHIVDNGCLVDTVNTSAD*	523

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr9g0360	522	SMART	fbox_2	54	95	IPR001810	GO:0005515
	Apr9g0360	522	MobiDBLite	consensus disorder prediction	281	296	-	-
	Apr9g0360	522	ProSiteProfiles	F-box domain profile.	48	95	IPR001810	GO:0005515
	Apr9g0360	522	MobiDBLite	consensus disorder prediction	277	296	-	-
	Apr9g0360	522	SUPERFAMILY	F-box domain	40	125	IPR036047	GO:0005515
	Apr9g0360	522	Pfam	F-box domain	53	90	IPR001810	GO:0005515
	Apr9g0360	522	Gene3D	-	36	130	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr9g0360	-		-	aprc:113847653	1002.28

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr9g0360	9	4813419	4815741	Apr9g0360	9	4813419	4815741	ECH