Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0357 ATGGAGGAGGTGCAGCCACACCCTGTGAAAGAGCAATTACCTGGAGTTCAATATTGCATTAACAGTCCTCCGCCATGGCGGGAAGCAGTGGTGTTGGGGTTTCAGCATTACCTTCTGACTCTTGGAATTACTGTTCTGATTCCAACTATAATTGTTCCTCAAATGGGTGGAGGAGATGCAGAGAAGGGTAGGGTGATTCAGACCCTTCTGTTTGTTTCTGGATTAAGCACATTACTCCAATCTTGGTTTGGAACCCGGTTGCCAATTGTAGTTGTTGGTTCATACACTTATGTGATACCCATAATTTCAATTATCCAGGCTAGCAGATATGCTTCCATTACAGATACTTATGAGAGGTTTACTCAGACAATGAGAGGGATTCAAGGTGCCTTGATCATTAGTTCGTGTTTCCAAATGGCTATTGGATTTTTTGGGTTTTGGAGGAATGCTGTTAGGTTCCTAAGCCCAATTTGTGTAGTCCCATTTGTAACTTTCACTGGACTCAGCCTCTATCATCTTGGTTTCCCAATGCTAGCAAAATGTGTTGAAGTTGGACTTCCGGCACTAATTGTTTTTGTTTTCATCTCACAGTATCTCAATCGTTATATTAGCACCCAGAAGCCTATACATGATCGATTTGCAGTGTTGTTTACAGTTGCAATTGCATGGTTATATGCACAGCTTCTAACTTCATGCACTGTATATAACCACAAGCCAGAAAGTACACAGATTAGTTGCCGCACTGATCGTTCTGGACTTATTAGTGCCTCACCATGGGTGTATTTTCCTTTTCCCTTCCAATGGGGGAGTCCTACTTTCAATGCTGGGGAAGCTTTTGCCATGATAGCTGCTTCTTTTGTTTCTCTTTTTGAGTATACTGGTACAGCTTATGCTGCAGCAAGGTATGGAAGTGCCACACCAGTGCCACCATCTGTTATCAGTCGTGGAGCTGGCTGGGTGGGAGTTAGTGCTTTGCTCAATGGCATGTTTGGATCTGTAAGTGGAAGCACAGCATCAGTGGAAAATGCTGGTTTGCTGGCATTGACAAGAGTAGGAAGCCGCAGAGTCATCCAAATATCAGCTGGCTTTATGATTTTCTTCTCTTTATTTGGCAAATTTGGAGCATTTTTTGCTTCAGTGCCTATGCCAATCATAGCTGCACTATATTGTGTATTATTTGGCTATGCATCTTCAGCGGGTCTTGGCTTTCTCCAGTTCTGTAACCTCAACAATTTCAGAACCAAATTCGTGTTGGGCTTCTCATTCTTCTTAGGCATCTCCATACCACAATATTTCTCAGAATATTATCATGTAAAGAAGGATCATGCAGGTCCTAGATGGTTCAATGATGTAGTTACTGTTATCTTCATGTCCCACACAACAGTTGCTGCAATGATTGCTTTCATTTTGGATATAACACTACATCGTGAGAATGATGCAGCCCGAAAAGACAGTGGCTTGCAATGGTGGGAGAGGTTTAGCTTGTACAATGCAGATGTTAGGAATAATGAATTCTACTCTTTACCATACAGGCTCGATGAGCTTTTCCCAGCCGTTTAA 1560 0.4237 MEEVQPHPVKEQLPGVQYCINSPPPWREAVVLGFQHYLLTLGITVLIPTIIVPQMGGGDAEKGRVIQTLLFVSGLSTLLQSWFGTRLPIVVVGSYTYVIPIISIIQASRYASITDTYERFTQTMRGIQGALIISSCFQMAIGFFGFWRNAVRFLSPICVVPFVTFTGLSLYHLGFPMLAKCVEVGLPALIVFVFISQYLNRYISTQKPIHDRFAVLFTVAIAWLYAQLLTSCTVYNHKPESTQISCRTDRSGLISASPWVYFPFPFQWGSPTFNAGEAFAMIAASFVSLFEYTGTAYAAARYGSATPVPPSVISRGAGWVGVSALLNGMFGSVSGSTASVENAGLLALTRVGSRRVIQISAGFMIFFSLFGKFGAFFASVPMPIIAALYCVLFGYASSAGLGFLQFCNLNNFRTKFVLGFSFFLGISIPQYFSEYYHVKKDHAGPRWFNDVVTVIFMSHTTVAAMIAFILDITLHRENDAARKDSGLQWWERFSLYNADVRNNEFYSLPYRLDELFPAV* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0357 519 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 10-RELATED 2 518 - -
Apr9g0357 519 Pfam Permease family 28 432 IPR006043 GO:0016020|GO:0022857|GO:0055085
Apr9g0357 519 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 2 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0357 Apr-Chr9 4789460 4793851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0357 2 518 Organic Solute Cotransporters AT1G65550 64.068 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0357 - - gmx:100801755 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0357 9 4789460 4793851 Apr9g0357 9 4789460 4793851 ECH
Apr5g1451 5 18594989 18598825 Apr9g0357 9 4789460 4793851 PCT