Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0355 ATGGGCGAACTTTACAAAATCAGCTCCATCGATTGGCGACCATCGCCGGTCGTAGCCTTAGCCACTAGCGTCGACGGCTTGCGAGTCGCCGCAGCTCGCCAAGACGGCTCGCTCGAAGTCTGGCTCGTATCTCCCGGTTCCATCGGCTGGCACTCTCAGCTGACTATACACGGAGACCCTAACAGAAGAGTGTCATCGCTTGTTTGGTGTTCCGGCGGTTCTGACGGAGGTCGATTATTTTCGTCTAACATAGACGGTTCCGTTACTAAATGGGATCTTTTCCACTTGAATCAAACGACAGTGCTAGAATCGGATGGAGTCTCGATATGGCAAATGGCTGTTACACTGCCTATGAATGACAAAATAAACGCTGAAACTAAGGGTGGTATGGGGAATGGACATGTGAATAAATTCCATGATTTTGATGAACGTGAGAGTAGTGAAAGTGATGAAGATTCTGATTTGCCTGGCCCTCTTGAACATTCCATCAGTGAGCATCCACGTGTAGCAATTGGTTTTGACGATGGGTGTGTGAGAATTTATTCCATCTCTGACACGGATGAATTTATCTACGTAAAATCCTTGCCCCGAGTGAAAGGACGAGTTTTAAGTGTAACTTGGAGTACAGACGCTAACTTCATATATTCAGGAAGTAGTGATGGGTTGATACGATGCTGGGATGTTACATCAGGTAATGAAATCTATAGGATTACGGCTGGACTTGGAGGTTTGTGCAGTGGACATGAACTTTGTATATGGTCATTGATGTCATTAAGGTCTGGAACACTTGTTAGTGCAGACAGCAGTGGTAGTGTCCAGTTTTGGGACAGCCAACATGGAACTCTCTTGCAAGCACATTCTTTACACAAGGGAGACGTAAATGCTCTTGCAGCAGCCCCTAGTCATGATAGGGTGTTCTCTGCTGGTTCTGATGGTCAGGTTATTCTTTACAAGCTGTCTAGTAGTCAGTCAGTGTCTTCTGATGGTATCCATTATCCATCAATGATGAAGAGGTGGATCTATGTTCATTATGTAAGGGCTCATACTCATGATGTCAGGGCCTTGACTGTTGCTCTACCAATAAGTCAAGAAGGTCTGTTTGAAAATATTTTGCCAGATGAGAGGAGTAAAAGAGCTCGATGTGAAAAGAAGCCCATTGATTTTAGTTACCATAAGTGGGCCCATTTGGGGGTTCCCATGCTTATCTCGGCAGGAGATGACACAAAACTCTTTGCATACCCTGTGAAGGAATTTACCAAATTTTCTCCTCATGATATCTGTCCTGCGCCTCAAAGAACACCCATTCAACTAGTGCTTGATACTGCCTTTAATCAATCTTCAATACTTTTAGTTCAGTCTTTGCATTGGATAGATGTTCATTTGCTACAACTCAGAAATGTTCGCACACCTGGTGGCTTTGCAAAGACTGAAATACTTGCCCGAGTTAAGAGCAAGGCATCTAGGAAGATAATTTGCAGCACCATTGCTAATTCAGGGGTGCTTTTTGCGTACTCTGATCATGTAAAGCCTAATCTTTTTGAATTGCAAAGGTGTGAAGTTGGAAAAATGACATGGAGTGTTAGTAGAAGGAAGCTTCCACAGAGATTACCATTTGCGCATTCTATGATTTTTACCCATGACTCCTCTTGGTTAATAGTAGCTGGGCATGATAGAAGGATATATGTTATCGATGTTGGTAGCTCAGAATTAGTACATACTTTTACACCTTGTCGGGAATTGCAAGATGAAGAATTGCCTCCTACTGAGCCGCCCATAACAAGATTGTTTACTAGTTCTGATCGGCAGTGGTTGGCAGCTGTGAACTGCTTTGGGGATATATATGTATTTAACTTGGAGATACTAAGGCAGCACTGGTTCATTTCAAGATTAGATGGTGCCTCTGTTACAGCTGGTGGATTTCCACCCCAGAACAACAATGTACTGATAGTTACAACTTCCTCAAATCAAGTGTATGCATTTGATGTAGAGGCCAAGCAATTAGGAGAATGGTCAATGCGGCACACATTTGTTCTTCCTAGAAGATACCAGGAATTTCCTGGTGAAGTTATTGGGCTTTCCTTCCCTCCCTCGGCGACTTCGTCTTCTGTTGTTGTTTACAGCTCCAGGGCGATGTGCTTGATTGACTTTGGGTTGCCTGTGGAGCAAGATGATAGTGATATGTTAAATACTCAGGATTCAATGGTCAGGAATTTACAAAATTTTAATGTTAAGAAGAGGACTAAACATAGGAAGAACTTTGAAGTTTTACCTTTAGAAAATCCTGTTTTATTTTTAGCCCATATTTCAAAAAATTCCTTCTTTATGATAGACAAACCCTGGTTGCAAGTGGTCAAGAGTTTAGAAGCCGCACCAGTTCACAGACATATATTTGGGACATAA 2400 0.4275 MGELYKISSIDWRPSPVVALATSVDGLRVAAARQDGSLEVWLVSPGSIGWHSQLTIHGDPNRRVSSLVWCSGGSDGGRLFSSNIDGSVTKWDLFHLNQTTVLESDGVSIWQMAVTLPMNDKINAETKGGMGNGHVNKFHDFDERESSESDEDSDLPGPLEHSISEHPRVAIGFDDGCVRIYSISDTDEFIYVKSLPRVKGRVLSVTWSTDANFIYSGSSDGLIRCWDVTSGNEIYRITAGLGGLCSGHELCIWSLMSLRSGTLVSADSSGSVQFWDSQHGTLLQAHSLHKGDVNALAAAPSHDRVFSAGSDGQVILYKLSSSQSVSSDGIHYPSMMKRWIYVHYVRAHTHDVRALTVALPISQEGLFENILPDERSKRARCEKKPIDFSYHKWAHLGVPMLISAGDDTKLFAYPVKEFTKFSPHDICPAPQRTPIQLVLDTAFNQSSILLVQSLHWIDVHLLQLRNVRTPGGFAKTEILARVKSKASRKIICSTIANSGVLFAYSDHVKPNLFELQRCEVGKMTWSVSRRKLPQRLPFAHSMIFTHDSSWLIVAGHDRRIYVIDVGSSELVHTFTPCRELQDEELPPTEPPITRLFTSSDRQWLAAVNCFGDIYVFNLEILRQHWFISRLDGASVTAGGFPPQNNNVLIVTTSSNQVYAFDVEAKQLGEWSMRHTFVLPRRYQEFPGEVIGLSFPPSATSSSVVVYSSRAMCLIDFGLPVEQDDSDMLNTQDSMVRNLQNFNVKKRTKHRKNFEVLPLENPVLFLAHISKNSFFMIDKPWLQVVKSLEAAPVHRHIFGT* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0355 799 Gene3D - 244 367 IPR015943 GO:0005515
Apr9g0355 799 ProSiteProfiles Trp-Asp (WD) repeats profile. 286 327 IPR001680 GO:0005515
Apr9g0355 799 Gene3D - 162 243 IPR015943 GO:0005515
Apr9g0355 799 Gene3D - 6 139 IPR015943 GO:0005515
Apr9g0355 799 Gene3D - 521 714 IPR015943 GO:0005515
Apr9g0355 799 MobiDBLite consensus disorder prediction 126 162 - -
Apr9g0355 799 ProSiteProfiles Trp-Asp (WD) repeats profile. 195 236 IPR001680 GO:0005515
Apr9g0355 799 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 799 IPR044622 GO:0010073|GO:0035266
Apr9g0355 799 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 195 232 - -
Apr9g0355 799 SUPERFAMILY WD40 repeat-like 167 667 IPR036322 GO:0005515
Apr9g0355 799 SUPERFAMILY Putative isomerase YbhE 6 114 - -
Apr9g0355 799 SMART WD40_4 49 92 IPR001680 GO:0005515
Apr9g0355 799 SMART WD40_4 188 227 IPR001680 GO:0005515
Apr9g0355 799 SMART WD40_4 238 276 IPR001680 GO:0005515
Apr9g0355 799 SMART WD40_4 3 42 IPR001680 GO:0005515
Apr9g0355 799 SMART WD40_4 279 318 IPR001680 GO:0005515
Apr9g0355 799 SMART WD40_4 529 564 IPR001680 GO:0005515
Apr9g0355 799 Pfam WD domain, G-beta repeat 202 227 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0355 K14548 - gmx:100797494 1234.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0355 9 4772372 4778896 Apr9g0355 9 4772372 4778896 ECH