Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0349 ATGTTCTTCCACGAAGAGGAAGCGGTTCAGTCCTCATGTTTTCCGTTTCTCGAAACCCCGTTCACTCCAAGTGATATAGAGGAGCTGTTGTCCTTCATTAACCAACCGGTTGAACCGGCCAGTCCGGGATCCGGTTCACAGGGATCGAACCGAGCGGTTTACTCGACGCACGAGAGAAAGCTTAGGCGAATGCAATCGAACCGAGAATCAGCGAGGCGGTCCCGTTGGAGAAAGAAGCGTCATTTGGAGAACCTCACGAACCAAGTGAACCGGTTGAGAATTGAAAACCGAGAATTAAAAAACCGGTTATGCGTCACCATGCACAACAATCTTTTACTAGCTGTGGAGAATGAACGCTTAAGATGCGAATCCGTTACCCTCGGGTCTAAACTCTCCGATCTATATCAAATTTTAGGCACCGTGCTACAATAG 432 0.4838 MFFHEEEAVQSSCFPFLETPFTPSDIEELLSFINQPVEPASPGSGSQGSNRAVYSTHERKLRRMQSNRESARRSRWRKKRHLENLTNQVNRLRIENRELKNRLCVTMHNNLLLAVENERLRCESVTLGSKLSDLYQILGTVLQ* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0349 143 MobiDBLite consensus disorder prediction 37 76 - -
Apr9g0349 143 SMART brlzneu 55 119 IPR004827 GO:0003700|GO:0006355
Apr9g0349 143 CDD bZIP_plant_GBF1 60 108 IPR045314 GO:0003700|GO:0006355
Apr9g0349 143 SUPERFAMILY Leucine zipper domain 59 110 IPR046347 GO:0003700|GO:0006355
Apr9g0349 143 MobiDBLite consensus disorder prediction 55 71 - -
Apr9g0349 143 PANTHER BZIP TRANSCRIPTION FACTOR 19 142 - -
Apr9g0349 143 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 62 77 IPR004827 GO:0003700|GO:0006355
Apr9g0349 143 MobiDBLite consensus disorder prediction 37 54 - -
Apr9g0349 143 Coils Coil 54 74 - -
Apr9g0349 143 PANTHER BZIP TRANSCRIPTION FACTOR 44 19 142 - -
Apr9g0349 143 Coils Coil 82 102 - -
Apr9g0349 143 Gene3D - 57 108 - -
Apr9g0349 143 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 57 103 IPR004827 GO:0003700|GO:0006355
Apr9g0349 143 Pfam bZIP transcription factor 59 103 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0349 Apr-Chr9 4689621 4690052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0349 3 138 bZIP Transcription Factor Family AT3G49760 38.462 1.99e-25 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr9g0349 bZIP_1 7.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0349 - - gmx:102668006 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0349 9 4689621 4690052 Apr5g1441 5 18505429 18505857 PCT